RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 ZFC3H1O60293 1989 aaKnown RBP17.35■□□□□ 0.37
PHGDH-232ENST00000641947 A0A0G2JND7 137 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 INPP4BO15327 924 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 H2AFYO75367 372 aaKnown RBP17.35■□□□□ 0.37
PHGDH-232ENST00000641947 ATP1B2P14415 290 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-232ENST00000641947 HOXB2P14652 356 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 FOSL2P15408 326 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 C5AR1P21730 350 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 CCR7P32248 378 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 HK3P52790 923 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 NFKB2Q00653 900 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 FAM219BQ5XKK7 198 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 ZNF776Q68DI1 518 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-232ENST00000641947 TRIM67Q6ZTA4 783 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 HDDC3Q8N4P3 179 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 ZBTB2Q8N680 514 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 GLYATL1Q969I3 302 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 TMEM120AQ9BXJ8 343 aa17.35■□□□□ 0.37
PHGDH-232ENST00000641947 LRRC14BA6NHZ5 514 aa17.34■□□□□ 0.37
PHGDH-232ENST00000641947 HGSO14964 777 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-232ENST00000641947 RNASEH1O60930 286 aaKnown RBP17.34■□□□□ 0.37
PHGDH-232ENST00000641947 IL9P15248 144 aa17.34■□□□□ 0.37
PHGDH-232ENST00000641947 MPSTP25325 297 aa17.34■□□□□ 0.37
PHGDH-232ENST00000641947 GRSF1Q12849 480 aaKnown RBP eCLIP17.34■□□□□ 0.37
PHGDH-232ENST00000641947 ARL13AQ5H913 290 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-232ENST00000641947 ZNF765Q7L2R6 523 aa17.34■□□□□ 0.37
PHGDH-232ENST00000641947 TRIM74Q86UV6 250 aa17.34■□□□□ 0.37
PHGDH-232ENST00000641947 RAVER1Q8IY67 606 aaKnown RBP17.34■□□□□ 0.37
PHGDH-232ENST00000641947 CCNYL1Q8N7R7 359 aa17.34■□□□□ 0.37
PHGDH-232ENST00000641947 BEND7Q8N7W2 519 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-232ENST00000641947 PIWIL2Q8TC59 973 aaKnown RBP17.34■□□□□ 0.37
PHGDH-232ENST00000641947 CXorf40AQ8TE69 158 aa17.34■□□□□ 0.37
PHGDH-232ENST00000641947 PDLIM5Q96HC4 596 aaKnown RBP17.34■□□□□ 0.37
PHGDH-232ENST00000641947 SHCBP1LQ9BZQ2 653 aa17.34■□□□□ 0.37
PHGDH-232ENST00000641947 LATS2Q9NRM7 1088 aa17.34■□□□□ 0.37
PHGDH-232ENST00000641947 SPATS2LQ9NUQ6 558 aaKnown RBP17.34■□□□□ 0.37
PHGDH-232ENST00000641947 ZNF195O14628 629 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 LZTS3O60299 673 aaPredicted RBP17.33■□□□□ 0.37
PHGDH-232ENST00000641947 HSPA4LO95757 839 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 CTSCP53634 463 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 CCINQ13939 588 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 LEXMQ3ZCV2 418 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 PTCRAQ6ISU1 281 aaPredicted RBP17.33■□□□□ 0.37
PHGDH-232ENST00000641947 SBSNQ6UWP8 590 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 PTGR2Q8N8N7 351 aaPredicted RBP17.33■□□□□ 0.37
PHGDH-232ENST00000641947 RASGEF1AQ8N9B8 481 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 PLA2G15Q8NCC3 412 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 STAG3L4Q8TBR4 150 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 KCNV2Q8TDN2 545 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 SREK1Q8WXA9 508 aaKnown RBP17.33■□□□□ 0.37
PHGDH-232ENST00000641947 CCT6BQ92526 530 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 FAM131CQ96AQ9 280 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 RNF112Q9ULX5 631 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 USH1CQ9Y6N9 552 aa17.33■□□□□ 0.37
PHGDH-232ENST00000641947 IGLON5A6NGN9 336 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 OR2AG2A6NM03 316 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 CCT8L1PA6NM43 557 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 F8W8V4 182 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 AP1G1O43747 822 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 RNASEH2AO75792 299 aaKnown RBP17.33■□□□□ 0.36
PHGDH-232ENST00000641947 SIX3O95343 332 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-232ENST00000641947 TFF2Q03403 129 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 DPTQ07507 201 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 FBXO48Q5FWF7 155 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 ZNF678Q5SXM1 525 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 SEL1L3Q68CR1 1132 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 TMEM92Q6UXU6 159 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 CYHR1Q6ZMK1 362 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 TRPM8Q7Z2W7 1104 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 FITM2Q8N6M3 262 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 RPLP0P6Q8NHW5 317 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 AGR3Q8TD06 166 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 L3HYPDHQ96EM0 354 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 GSTO2Q9H4Y5 243 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 TNFRSF12AQ9NP84 129 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 CD93Q9NPY3 652 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 ADAMTS6Q9UKP5 1117 aa17.33■□□□□ 0.36
PHGDH-232ENST00000641947 TMEM202A6NGA9 273 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 SUPT3HB4E1H0 165 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 NPHS1O60500 1241 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 SUPT3HO75486 399 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 OR56A5P0C7T3 313 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 SRFP11831 508 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 MSH3P20585 1137 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 AOAHP28039 575 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 ARFIP2P53365 341 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 AQP5P55064 265 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 GBX1Q14549 363 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 STARD3Q14849 445 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 E2F5Q15329 346 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 PPP1R3AQ16821 1122 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 PFKFB4Q16877 469 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 UNC50Q53HI1 259 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 RAET1GQ6H3X3 334 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 SDE2Q6IQ49 451 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 SPATS2Q86XZ4 545 aaKnown RBP17.32■□□□□ 0.36
PHGDH-232ENST00000641947 TMPRSS6Q8IU80 811 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 VRK3Q8IV63 474 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 PPP4R1Q8TF05 950 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 DLG3Q92796 817 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms