RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 VPS37AQ8NEZ2 397 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 OR56A4Q8NGH8 313 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 IGDCC4Q8TDY8 1250 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 CACTINQ8WUQ7 758 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 TMEM171Q8WVE6 324 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 HAS1Q92839 578 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 ZNF514Q96K75 400 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 APOOQ9BUR5 198 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 MRM3Q9HC36 420 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 TAS2R14Q9NYV8 317 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 CPSF3Q9UKF6 684 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 INTS6Q9UL03 887 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 ASB1Q9Y576 335 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 PHF3Q92576 2039 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 INTS1Q8N201 2190 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 CMYA5Q8N3K9 4069 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 TUBAL3A6NHL2 446 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 TIMM23O14925 209 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 ASNA1O43681 348 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 PIP5K1CO60331 668 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 DLX3O60479 287 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 DNAJC8O75937 253 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 BAG4O95429 457 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 ECEL1O95672 775 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 OR52Z1P0C646 297 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 VDRP11473 427 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 TACR1P25103 407 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 FOLR3P41439 243 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 SLFN5Q08AF3 891 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 BIRC3Q13489 604 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 PLCL1Q15111 1095 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 SOWAHAQ2M3V2 549 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 PLA2G4EQ3MJ16 856 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 HYIQ5T013 277 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 FIGNL1Q6PIW4 674 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 ENPP7Q6UWV6 458 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 RINLQ6ZS11 566 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 CEP128Q6ZU80 1094 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 TRMT2AQ8IZ69 625 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 SHISA5Q8N114 240 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 CLIP3Q96DZ5 547 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 MPP4Q96JB8 637 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 SLC41A2Q96JW4 573 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 SH3GL2Q99962 352 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 IFT22Q9H7X7 185 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 NLRC4Q9NPP4 1024 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 TAAR2Q9P1P5 351 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 HCN3Q9P1Z3 774 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 DDX25Q9UHL0 483 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 POLG2Q9UHN1 485 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 MORC2Q9Y6X9 1032 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 CHD5Q8TDI0 1954 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 CCDC78A2IDD5 438 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 HYKKA2RU49 373 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 CACNB4O00305 520 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 UBFD1O14562 309 aaKnown RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 FRS3O43559 492 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 TM7SF2O76062 418 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 SNUPNO95149 360 aaKnown RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 MSL3P1P0C860 447 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 HKR1P10072 659 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 P4HA1P13674 534 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 SLC25A16P16260 332 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 PCMT1P22061 227 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 NDST1P52848 882 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 OCRLQ01968 901 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 STK3Q13188 491 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 GTF2H3Q13889 308 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 SLC9A5Q14940 896 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 ZACNQ401N2 412 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 PLEKHS1Q5SXH7 462 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 GPRC6AQ5T6X5 926 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 PIK3R6Q5UE93 754 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 PWWP2BQ6NUJ5 590 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 MCATQ8IVS2 390 aaKnown RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 TMEM57Q8N5G2 664 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 SLC22A8Q8TCC7 542 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 MRAPQ8TCY5 172 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 ZNF418Q8TF45 676 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 TSACCQ96A04 125 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 TMEM125Q96AQ2 219 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 PTERQ96BW5 349 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 TRMT61AQ96FX7 289 aaKnown RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 PKNOX2Q96KN3 472 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 TNFRSF13CQ96RJ3 184 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 CD180Q99467 661 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 EIF2AK1Q9BQI3 630 aaKnown RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 CHMP4BQ9H444 224 aaKnown RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 SH3GLB2Q9NR46 395 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 GPN3Q9UHW5 284 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 KIAA1109Q2LD37 5005 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 A0A096LNT2 108 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 TRIM49BA6NDI0 452 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 ELOA3DA6NLF2 546 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 A8MU76 341 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 TTI1O43156 1089 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 SNAP91O60641 907 aa3.38□□□□□ -1.87
CCDC7-213ENST00000639290 TMIGD3P0DMS9 266 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-213ENST00000639290 RBP3P10745 1247 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms