RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 SPHK2Q9NRA0 654 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 B4GALT6Q9UBX8 382 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 RIMKLBQ9ULI2 386 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 GOLGA4Q13439 2230 aaKnown RBP7.8□□□□□ -1.16
GABRB3-225ENST00000638099 OTOL1A6NHN0 477 aaPredicted RBP7.8□□□□□ -1.16
GABRB3-225ENST00000638099 SLCO1B7G3V0H7 640 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 PSMD12O00232 456 aaPredicted RBP7.8□□□□□ -1.16
GABRB3-225ENST00000638099 NR5A2O00482 541 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 FBP2O00757 339 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 HLA-EP13747 358 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 ANPEPP15144 967 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 PAX7P23759 505 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 PTGER3P43115 390 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 HTR6P50406 440 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 SNRPD1P62314 119 aaKnown RBP7.8□□□□□ -1.16
GABRB3-225ENST00000638099 IRX1P78414 480 aaPredicted RBP7.8□□□□□ -1.16
GABRB3-225ENST00000638099 SLC34A1Q06495 639 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 PPIGQ13427 754 aaKnown RBP eCLIP7.8□□□□□ -1.16
GABRB3-225ENST00000638099 MUM1Q2TAK8 710 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 ARSIQ5FYB1 569 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 C6orf163Q5TEZ5 329 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 SERPINA13PQ6UXR4 307 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 LARP4Q71RC2 724 aaKnown RBP eCLIP7.8□□□□□ -1.16
GABRB3-225ENST00000638099 MYLK4Q86YV6 388 aaPredicted RBP7.8□□□□□ -1.16
GABRB3-225ENST00000638099 FBXW8Q8N3Y1 598 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 ACTRT2Q8TDY3 377 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 PBXIP1Q96AQ6 731 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 TEX37Q96LM6 180 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 TCF12Q99081 682 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 BRD9Q9H8M2 597 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 PIDD1Q9HB75 910 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 LATS2Q9NRM7 1088 aa7.8□□□□□ -1.16
GABRB3-225ENST00000638099 MRPS23Q9Y3D9 190 aaKnown RBP7.8□□□□□ -1.16
GABRB3-225ENST00000638099 SCN8AQ9UQD0 1980 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 HELZP42694 1942 aaKnown RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 MYO15AQ9UKN7 3530 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 CAPN8A6NHC0 703 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 WASH3PC4AMC7 463 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 FFAR3O14843 346 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 GPR42O15529 346 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 DNAJA2O60884 412 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 LEFTY1O75610 366 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 HGFP14210 728 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 PBX2P40425 430 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 CASP2P42575 452 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 VPS26BQ4G0F5 336 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 SGO1Q5FBB7 561 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 ANKS6Q68DC2 871 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 PGM2L1Q6PCE3 622 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 FUNDC1Q8IVP5 155 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 CLYBLQ8N0X4 340 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 OR2A12Q8NGT7 310 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 OR2T11Q8NH01 316 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 RP9Q8TA86 221 aaKnown RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 N4BP2L2Q92802 583 aaPredicted RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 MTFMTQ96DP5 389 aaKnown RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 EGFL8Q99944 293 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 CCDC28BQ9BUN5 200 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 EBF3Q9H4W6 596 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 RETREG1Q9H6L5 497 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 NOL11Q9H8H0 719 aaKnown RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 ELOVL2Q9NXB9 296 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 HACD3Q9P035 362 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 POLG2Q9UHN1 485 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 MCM8Q9UJA3 840 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 SLC25A13Q9UJS0 675 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 PCTPQ9UKL6 214 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 E7ENX8 843 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 RFXAPO00287 272 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 CCNT2O60583 730 aaKnown RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 ESR1P03372 595 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 ATP5BP06576 529 aaKnown RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 CTSLP07711 333 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 C1SP09871 688 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 ITGALP20701 1170 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 ACRV1P26436 265 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 SLC26A3P40879 764 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 ETV3P41162 512 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 SLC6A11P48066 632 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 MRPS22P82650 360 aaKnown RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 B4GALNT1Q00973 533 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 CREMQ03060 361 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 HSPA14Q0VDF9 509 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 BOP1Q14137 746 aaKnown RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 CAPRIN1Q14444 709 aaKnown RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 TRMT5Q32P41 509 aaKnown RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 CARD16Q5EG05 197 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 LETMD1Q6P1Q0 360 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 SBSNQ6UWP8 590 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 Q6ZVL8 140 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 SNX20Q7Z614 316 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 VRK3Q8IV63 474 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 NKAPQ8N5F7 415 aaKnown RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 RHEBL1Q8TAI7 183 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 KCNJ9Q92806 393 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 ATP6V1E2Q96A05 226 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 IGFLR1Q9H665 355 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 TMPRSS11EQ9UL52 423 aa7.79□□□□□ -1.16
GABRB3-225ENST00000638099 CORO1CQ9ULV4 474 aaPredicted RBP7.79□□□□□ -1.16
GABRB3-225ENST00000638099 COQ6Q9Y2Z9 468 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms