RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SLC23A2Q9UGH3 650 aa18.66■□□□□ 0.58
CLN6-221ENST00000637494 PTPRQQ9UMZ3 2332 aa18.66■□□□□ 0.58
CLN6-221ENST00000637494 GRID2IPA4D2P6 1211 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 C5orf60A6NFR6 353 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.65■□□□□ 0.58
CLN6-221ENST00000637494 BUD23O43709 281 aaKnown RBP18.65■□□□□ 0.58
CLN6-221ENST00000637494 UGT1A9O60656 530 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 CRTAMO95727 393 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 PRB1P04280 392 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 PYGMP11217 842 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 UGT1A6P19224 532 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 UGT1A1P22309 533 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 UGT1A4P22310 534 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 RPL10P27635 214 aaKnown RBP18.65■□□□□ 0.58
CLN6-221ENST00000637494 PSMB4P28070 264 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 UGT1A3P35503 534 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 UBE2IP63279 158 aaKnown RBP18.65■□□□□ 0.58
CLN6-221ENST00000637494 TAF1AQ15573 450 aaPredicted RBP18.65■□□□□ 0.58
CLN6-221ENST00000637494 LONRF2Q1L5Z9 754 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 AGAP9Q5VTM2 703 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 KIAA1614Q5VZ46 1190 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 ABRAXAS1Q6UWZ7 409 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 WASH2PQ6VEQ5 465 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 AMZ2Q86W34 360 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 LRRC57Q8N9N7 239 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 DDHD1Q8NEL9 900 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 ZNF514Q96K75 400 aaPredicted RBP18.65■□□□□ 0.58
CLN6-221ENST00000637494 SPATA13Q96N96 652 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 TBC1D10AQ9BXI6 508 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 UGT1A7Q9HAW7 530 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 UGT1A10Q9HAW8 530 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 UGT1A8Q9HAW9 530 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 WASH6PQ9NQA3 447 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 OCIAD1Q9NX40 245 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 KLHL3Q9UH77 587 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 DNMT3AQ9Y6K1 912 aaPredicted RBP18.65■□□□□ 0.58
CLN6-221ENST00000637494 IGSF10Q6WRI0 2623 aa18.65■□□□□ 0.58
CLN6-221ENST00000637494 EFSO43281 561 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 UBXN7O94888 489 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 CDC25BP30305 580 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 SLC19A1P41440 591 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 KHDC1Q4VXA5 237 aaKnown RBP18.64■□□□□ 0.57
CLN6-221ENST00000637494 TMEM220Q6QAJ8 160 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 CEACAM20Q6UY09 585 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 ARHGEF18Q6ZSZ5 1173 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 ARHGAP22Q7Z5H3 698 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 DTX1Q86Y01 620 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 ZNF547Q8IVP9 402 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 IL22RA1Q8N6P7 574 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 SPC24Q8NBT2 197 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 ZNF398Q8TD17 642 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 ALG3Q92685 438 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 FAM118BQ9BPY3 351 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 ZPBPQ9BS86 351 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 SCHIP1Q9P0W5 487 aaPredicted RBP18.64■□□□□ 0.57
CLN6-221ENST00000637494 TRIM10Q9UDY6 481 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 FEZ2Q9UHY8 353 aaPredicted RBP18.64■□□□□ 0.57
CLN6-221ENST00000637494 TMPRSS11EQ9UL52 423 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 B3GALT1Q9Y5Z6 326 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 ARL5AQ9Y689 179 aa18.64■□□□□ 0.57
CLN6-221ENST00000637494 BPTFQ12830 3046 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 POP7O75817 140 aaKnown RBP18.63■□□□□ 0.57
CLN6-221ENST00000637494 PRAMEF1O95521 474 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 RALBP11234 206 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 DRG2P55039 364 aaKnown RBP18.63■□□□□ 0.57
CLN6-221ENST00000637494 MC2RQ01718 297 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 GPRC6AQ5T6X5 926 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 RANBP10Q6VN20 620 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 VASH2Q86V25 355 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 GAS2L3Q86XJ1 694 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 RASGEF1AQ8N9B8 481 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 OR4K2Q8NGD2 314 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 CCDC110Q8TBZ0 833 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 TTC9Q92623 222 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 TBL1YQ9BQ87 522 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 APOL2Q9BQE5 337 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 ARHGAP9Q9BRR9 750 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 ASB8Q9H765 288 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 SMOXQ9NWM0 555 aa18.63■□□□□ 0.57
CLN6-221ENST00000637494 ZNF624Q9P2J8 865 aaPredicted RBP18.63■□□□□ 0.57
CLN6-221ENST00000637494 KLHL33A6NCF5 533 aa18.62■□□□□ 0.57
CLN6-221ENST00000637494 OR2AG2A6NM03 316 aa18.62■□□□□ 0.57
CLN6-221ENST00000637494 HADHAP40939 763 aa18.62■□□□□ 0.57
CLN6-221ENST00000637494 ANKS6Q68DC2 871 aa18.62■□□□□ 0.57
CLN6-221ENST00000637494 AADACL2Q6P093 401 aa18.62■□□□□ 0.57
CLN6-221ENST00000637494 C11orf96Q7Z7L8 435 aa18.62■□□□□ 0.57
CLN6-221ENST00000637494 JPH3Q8WXH2 748 aaPredicted RBP18.62■□□□□ 0.57
CLN6-221ENST00000637494 ULK4Q96C45 1275 aa18.62■□□□□ 0.57
CLN6-221ENST00000637494 DCUN1D1Q96GG9 259 aa18.62■□□□□ 0.57
CLN6-221ENST00000637494 FBXO8Q9NRD0 319 aa18.62■□□□□ 0.57
CLN6-221ENST00000637494 CRLS1Q9UJA2 301 aa18.62■□□□□ 0.57
CLN6-221ENST00000637494 MN1Q10571 1320 aaPredicted RBP18.62■□□□□ 0.57
CLN6-221ENST00000637494 OR52A4PA6NMU1 304 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 POLR1CO15160 346 aaPredicted RBP18.61■□□□□ 0.57
CLN6-221ENST00000637494 TOX3O15405 576 aaPredicted RBP18.61■□□□□ 0.57
CLN6-221ENST00000637494 RASSF9O75901 435 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 SRP72O76094 671 aaKnown RBP18.61■□□□□ 0.57
CLN6-221ENST00000637494 FTCDO95954 541 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 ANKRD34CP0C6C1 535 aa18.61■□□□□ 0.57
CLN6-221ENST00000637494 TYRP1P17643 537 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms