RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 FGFR1OP2Q9NVK5 253 aa15.16■□□□□ 0.02
CLN6-219ENST00000637329 OXSMQ9NWU1 459 aa15.16■□□□□ 0.02
CLN6-219ENST00000637329 FBXL12Q9NXK8 326 aa15.16■□□□□ 0.02
CLN6-219ENST00000637329 WNT16Q9UBV4 365 aa15.16■□□□□ 0.02
CLN6-219ENST00000637329 SERGEFQ9UGK8 458 aa15.16■□□□□ 0.02
CLN6-219ENST00000637329 TMCO1Q9UM00 188 aa15.16■□□□□ 0.02
CLN6-219ENST00000637329 NCKAP1Q9Y2A7 1128 aa15.16■□□□□ 0.02
CLN6-219ENST00000637329 TMEM114B3SHH9 223 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 KERAO60938 352 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 SNNO75324 88 aaPredicted RBP15.15■□□□□ 0.02
CLN6-219ENST00000637329 TSPAN12O95859 305 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 SOD1P00441 154 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 FTH1P02794 183 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 GSTM1P09488 218 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 SBK3P0C264 359 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 ACADMP11310 421 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 FGF3P11487 239 aaPredicted RBP15.15■□□□□ 0.02
CLN6-219ENST00000637329 ENO3P13929 434 aaPredicted RBP15.15■□□□□ 0.02
CLN6-219ENST00000637329 KCNA4P22459 653 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 SERPINB5P36952 375 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 PGGT1BP53609 377 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 ADPRHP54922 357 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 DNAJB13P59910 316 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 RPS21P63220 83 aaKnown RBP15.15■□□□□ 0.02
CLN6-219ENST00000637329 GSTM4Q03013 218 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 MAP7D1Q3KQU3 841 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 GKAP1Q5VSY0 366 aaPredicted RBP15.15■□□□□ 0.02
CLN6-219ENST00000637329 RAET1GQ6H3X3 334 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 CACUL1Q86Y37 369 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 SLC22A9Q8IVM8 553 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 C10orf107Q8IVU9 208 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 ZBTB2Q8N680 514 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 CLDN19Q8N6F1 224 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 OR6Y1Q8NGX8 325 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 KIAA1191Q96A73 305 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 CCDC97Q96F63 343 aaPredicted RBP15.15■□□□□ 0.02
CLN6-219ENST00000637329 LINGO1Q96FE5 620 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 MRGPRX1Q96LB2 322 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 C1QTNF7Q9BXJ2 289 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 PITPNM3Q9BZ71 974 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 FAM107BQ9H098 131 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 CPSF2Q9P2I0 782 aaKnown RBP15.15■□□□□ 0.02
CLN6-219ENST00000637329 COQ6Q9Y2Z9 468 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 PRSS21Q9Y6M0 314 aa15.15■□□□□ 0.02
CLN6-219ENST00000637329 C19orf67A6NJJ6 358 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 SYCE1LA8MT33 242 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 ZBTB14O43829 449 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 TRIM13O60858 407 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 PCDH8O95206 1070 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 CHRNB1P11230 501 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 DGKAP23743 735 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 GPR1P46091 355 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 PRLHRP49683 370 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 DGKEP52429 567 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 STARD6P59095 220 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 OCRLQ01968 901 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 BST1Q10588 318 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 STX3Q13277 289 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 BCL7AQ4VC05 210 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 TMEM259Q4ZIN3 620 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 FAM47EQ6ZV65 393 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 BMP8AQ7Z5Y6 402 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 ADAMTSL2Q86TH1 951 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 ISCA2Q86U28 154 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 STAG3L4Q8TBR4 150 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 GANCQ8TET4 914 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 ASB12Q8WXK4 309 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 ZNF514Q96K75 400 aaPredicted RBP15.14■□□□□ 0.01
CLN6-219ENST00000637329 SLC30A3Q99726 388 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 ALG9Q9H6U8 611 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 SARS2Q9NP81 518 aaKnown RBP15.14■□□□□ 0.01
CLN6-219ENST00000637329 POLMQ9NP87 494 aaPredicted RBP15.14■□□□□ 0.01
CLN6-219ENST00000637329 THAP1Q9NVV9 213 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 NDRG2Q9UN36 371 aaKnown RBP15.14■□□□□ 0.01
CLN6-219ENST00000637329 LRRK1Q38SD2 2015 aa15.14■□□□□ 0.01
CLN6-219ENST00000637329 TCRBV21S2A2A0A5A6 115 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 VEGFDO43915 354 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 ATG13O75143 517 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 SMIM24O75264 130 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 SLC25A14O95258 325 aaPredicted RBP15.13■□□□□ 0.01
CLN6-219ENST00000637329 TGDSO95455 350 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 TROVE2P10155 538 aaKnown RBP eCLIP15.13■□□□□ 0.01
CLN6-219ENST00000637329 NDUFV2P19404 249 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 NAA20P61599 178 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 GBX1Q14549 363 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 PLEKHS1Q5SXH7 462 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 SYT13Q7L8C5 426 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 OTOAQ7RTW8 1153 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 PIWIL4Q7Z3Z4 852 aaKnown RBP15.13■□□□□ 0.01
CLN6-219ENST00000637329 SPATA21Q7Z572 469 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 PIGWQ7Z7B1 504 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 CPNE9Q8IYJ1 553 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 UBALD2Q8IYN6 164 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 MYO1HQ8N1T3 1032 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 SPATA6LQ8N4H0 392 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 PRSS33Q8NF86 280 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 LKAAEAR1Q8TD35 194 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 PTERQ96BW5 349 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 FAM136AQ96C01 138 aa15.13■□□□□ 0.01
CLN6-219ENST00000637329 ERLEC1Q96DZ1 483 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms