RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 SLC9B2Q86UD5 537 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 TRAPPC5Q8IUR0 188 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 AVL9Q8NBF6 648 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 OR10G6Q8NH81 332 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 DTX3LQ8TDB6 740 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 SH3KBP1Q96B97 665 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 AHCYL2Q96HN2 611 aaKnown RBP18.11■□□□□ 0.49
CLN6-214ENST00000636314 TTC25Q96NG3 672 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 TIMM29Q9BSF4 260 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 TMPRSS11EQ9UL52 423 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 DNAJC16Q9Y2G8 782 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 ARL5AQ9Y689 179 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 AHCTF1Q8WYP5 2266 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 C5orf60A6NFR6 353 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 OR5K4A6NMS3 321 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 C2orf81A6NN90 581 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 GPR39O43194 453 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 DUX1O43812 170 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 FAM87AP0C7U9 286 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 ZNF7P17097 686 aaPredicted RBP18.1■□□□□ 0.49
CLN6-214ENST00000636314 ITIH1P19827 911 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 LPOP22079 712 aaPredicted RBP18.1■□□□□ 0.49
CLN6-214ENST00000636314 CSF2RBP32927 897 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 NFATC2Q13469 925 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 TAF1AQ15573 450 aaPredicted RBP18.1■□□□□ 0.49
CLN6-214ENST00000636314 LDLRAP1Q5SW96 308 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 VASH2Q86V25 355 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 FAM71DQ8N9W8 422 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 BRSK1Q8TDC3 778 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 CCDC74BQ96LY2 380 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 DPYSL5Q9BPU6 564 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 TBL1YQ9BQ87 522 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 PRDM8Q9NQV8 689 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 ACSL6Q9UKU0 697 aa18.1■□□□□ 0.49
CLN6-214ENST00000636314 R3HDM2Q9Y2K5 976 aaKnown RBP18.1■□□□□ 0.49
CLN6-214ENST00000636314 UBR5O95071 2799 aaPredicted RBP18.09■□□□□ 0.49
CLN6-214ENST00000636314 IGHV5-10-1A0A0J9YXX1 117 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 TCRBV7S2A1N4TA0A589 114 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 PDZK1P1A8MUH7 402 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 NVLO15381 856 aaKnown RBP18.09■□□□□ 0.49
CLN6-214ENST00000636314 UGT1A9O60656 530 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 PRAMEF1O95521 474 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 ITGB2P05107 769 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 VCLP18206 1134 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 UGT1A6P19224 532 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 UGT1A1P22309 533 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 UGT1A4P22310 534 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 UGT1A3P35503 534 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 LIMK2P53671 638 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 MAPK10P53779 464 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 TMEM115Q12893 351 aaPredicted RBP18.09■□□□□ 0.49
CLN6-214ENST00000636314 PTPRCAPQ14761 206 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 C16orf72Q14CZ0 275 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 SEPT7Q16181 437 aaKnown RBP18.09■□□□□ 0.49
CLN6-214ENST00000636314 ATG14Q6ZNE5 492 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 ZNF547Q8IVP9 402 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 ZSCAN1Q8NBB4 408 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 RCBTB1Q8NDN9 531 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 DDHD1Q8NEL9 900 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 OR4K2Q8NGD2 314 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 OR4D9Q8NGE8 314 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 SLC35B2Q8TB61 432 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.09■□□□□ 0.49
CLN6-214ENST00000636314 UGT1A7Q9HAW7 530 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 UGT1A10Q9HAW8 530 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 UGT1A8Q9HAW9 530 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 STARD5Q9NSY2 213 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 SMOXQ9NWM0 555 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 CPNE7Q9UBL6 633 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 SLC23A2Q9UGH3 650 aa18.09■□□□□ 0.49
CLN6-214ENST00000636314 SPTA1P02549 2419 aa18.08■□□□□ 0.49
CLN6-214ENST00000636314 PRAMEF33A0A0G2JMD5 474 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 GAPDHSO14556 408 aaPredicted RBP18.08■□□□□ 0.48
CLN6-214ENST00000636314 HGSO14964 777 aaPredicted RBP18.08■□□□□ 0.48
CLN6-214ENST00000636314 PRAMEF10O60809 474 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 CRTAMO95727 393 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 AKT1P31749 480 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 PDE1BQ01064 536 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 SQSTM1Q13501 440 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 TRA2AQ13595 282 aaKnown RBP eCLIP18.08■□□□□ 0.48
CLN6-214ENST00000636314 SPARCL1Q14515 664 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 PARP6Q2NL67 630 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 P3H1Q32P28 736 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 GPRC6AQ5T6X5 926 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 ZNF574Q6ZN55 896 aaPredicted RBP18.08■□□□□ 0.48
CLN6-214ENST00000636314 ZFAND4Q86XD8 727 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 TRIM48Q8IWZ4 208 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 ALS2CR12Q96Q35 445 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 TMEM121Q9BTD3 319 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 FEZ2Q9UHY8 353 aaPredicted RBP18.08■□□□□ 0.48
CLN6-214ENST00000636314 FKBPLQ9UIM3 349 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 PCDHB11Q9Y5F2 797 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 PCDHGA4Q9Y5G9 962 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 COL12A1Q99715 3063 aa18.08■□□□□ 0.48
CLN6-214ENST00000636314 TERTO14746 1132 aaKnown RBP18.07■□□□□ 0.48
CLN6-214ENST00000636314 CCDC175P0C221 793 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 THRAP10827 490 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 IDSP22304 550 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 MPSTP25325 297 aa18.07■□□□□ 0.48
CLN6-214ENST00000636314 ETV5P41161 510 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms