RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TREX1Q9NSU2 369 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 ADAMTS6Q9UKP5 1117 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 IKZF3Q9UKT9 509 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 WDR81Q562E7 1941 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 PLXNB2O15031 1838 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ARID2Q68CP9 1835 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 OTOFQ9HC10 1997 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 MGAMO43451 1857 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 TRIOO75962 3097 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ILVBLA1L0T0 632 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 NPIPB15A6NHN6 443 aaPredicted RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 SYCE1LA8MT33 242 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 STK25O00506 426 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 TRAFD1O14545 582 aaPredicted RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 KDELR3O43731 214 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 CD1DP15813 335 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 LAG3P18627 525 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 HLA-FP30511 346 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 HOXC8P31273 242 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ADRA1AP35348 466 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 MAGEA11P43364 429 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 RPIAP49247 311 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 IRF5Q13568 498 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ATP13A5Q4VNC0 1218 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 SFT2D3Q587I9 215 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 REP15Q6BDI9 236 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 SLC2A7Q6PXP3 512 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 DHFR2Q86XF0 187 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 OR56A4Q8NGH8 313 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 MAGEE2Q8TD90 523 aaPredicted RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 TOP1MTQ969P6 601 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 AARSD1Q9BTE6 412 aaKnown RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 KLHL4Q9C0H6 718 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 S100A14Q9HCY8 104 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 DDX18Q9NVP1 670 aaKnown RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 B4GALT6Q9UBX8 382 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 PLAGL1Q9UM63 463 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 SEC16AO15027 2179 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ZNF487B1APH4 448 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 TMEM114B3SHH9 223 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 KLF11O14901 512 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 RHOP08100 348 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 CST5P28325 142 aaPredicted RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 CCR2P41597 374 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ALDH9A1P49189 494 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 FAM189BP81408 668 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 KRT72Q14CN4 511 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 TGFBIQ15582 683 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ZNF284Q2VY69 593 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 SETMARQ53H47 684 aaPredicted RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 TCEAL5Q5H9L2 206 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ZNF678Q5SXM1 525 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 CNKSR3Q6P9H4 555 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 SUSD1Q6UWL2 747 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 USP45Q70EL2 814 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 UBE2R2Q712K3 238 aaPredicted RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 RPAINQ86UA6 219 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 LRRC49Q8IUZ0 686 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 MMAAQ8IVH4 418 aaKnown RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 OFCC1Q8IZS5 231 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 LKAAEAR1Q8TD35 194 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 APBB2Q92870 758 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 EMILIN2Q9BXX0 1053 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 GRIP2Q9C0E4 1043 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 DNAJC28Q9NX36 388 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 KIAA1522Q9P206 1035 aaPredicted RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 SLC22A14Q9Y267 594 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 RNF11Q9Y3C5 154 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 CASP8AP2Q9UKL3 1982 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ANK1P16157 1881 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ATXN2Q99700 1313 aaKnown RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 PSME4Q14997 1843 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 PARP14Q460N5 1801 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 SBF1O95248 1867 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 TRIM43BA6NCK2 446 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 RAD51BO15315 384 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ULK1O75385 1050 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 EPHX1P07099 455 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 LEPRP48357 1165 aaKnown RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 PRKAA2P54646 552 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ACTR3P61158 418 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 HERVK_113P63132 956 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 CDC16Q13042 620 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 NAE1Q13564 534 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 FRG1Q14331 258 aaKnown RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 GK3PQ14409 553 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 TAF1AQ15573 450 aaPredicted RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 TMEM31Q5JXX7 168 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 ZNF621Q6ZSS3 439 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 LIMS2Q7Z4I7 341 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 YAF2Q8IY57 180 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 CFAP206Q8IYR0 622 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 RP9Q8TA86 221 aaKnown RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 FAM110BQ8TC76 370 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 CANT1Q8WVQ1 401 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 TMEM159Q96B96 161 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 TRIM43Q96BQ3 446 aaPredicted RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 CDK5RAP1Q96SZ6 601 aaKnown RBP7.42□□□□□ -1.22
PKP4-217ENST00000628904 TSC22D3Q99576 134 aa7.42□□□□□ -1.22
PKP4-217ENST00000628904 KCTD14Q9BQ13 255 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms