RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 PLD4Q96BZ4 506 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 B3GALT6Q96L58 329 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 MYRFLQ96LU7 910 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 RPRD1AQ96P16 312 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 SEMA3CQ99985 751 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 TRIM54Q9BYV2 358 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 IGFLR1Q9H665 355 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 SYTL2Q9HCH5 934 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 AGPAT4Q9NRZ5 378 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 AIG1Q9NVV5 245 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 ILVBLA1L0T0 632 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 OR51F1A6NGY5 319 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 NME4O00746 187 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 MRASO14807 208 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 TSPAN3O60637 253 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 LATS1O95835 1130 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 CAPN3P20807 821 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 CCDC85BQ15834 202 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 SMU1Q2TAY7 513 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 PITRM1Q5JRX3 1037 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 SLC8B1Q6J4K2 584 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 FAM217AQ8IXS0 508 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 DPP10Q8N608 796 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 MDGA1Q8NFP4 955 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 OR2T34Q8NGX1 318 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 OR2T3Q8NH03 318 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 RMDN1Q96DB5 314 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 GRIP2Q9C0E4 1043 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 PCDHAC1Q9H158 963 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 TUBA8Q9NY65 449 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 ACTR3BQ9P1U1 418 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 POLG2Q9UHN1 485 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 PCTPQ9UKL6 214 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 ZMIZ1Q9ULJ6 1067 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 CNOT6Q9ULM6 557 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 SPO11Q9Y5K1 396 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 MYOCOSA0A1B0GUC4 107 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 NR5A2O00482 541 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 ACSL4O60488 711 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 EFCAB14O75071 495 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 SRP72O76094 671 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 GJB5O95377 273 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 CLPTM1O96005 669 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 IDO1P14902 403 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 SLC6A2P23975 617 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 FOXA1P55317 472 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 PLIN5Q00G26 463 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 GNA12Q03113 381 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 TAF10Q12962 218 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 ZNF235Q14590 738 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 CTSL3PQ5NE16 218 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 C6orf52Q5T4I8 152 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 AMIGO2Q86SJ2 522 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 STAG3L4Q8TBR4 150 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 DDI1Q8WTU0 396 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 FBXO32Q969P5 355 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 RAD9AQ99638 391 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 NKX2-4Q9H2Z4 354 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 CAAP1Q9H8G2 361 aa7.1□□□□□ -1.27
CTNNA1-244ENST00000627109 PLXNA2O75051 1894 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 GOLGA8CPA6NN73 597 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 PRSS23O95084 383 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 TBX18O95935 607 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 ATP6V1B2P21281 511 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 DYNC1I2Q13409 638 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 C10orf120Q5SQS8 335 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 METTL2BQ6P1Q9 378 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 RNF19BQ6ZMZ0 732 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 EFL1Q7Z2Z2 1120 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 SATL1Q86VE3 508 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 CIR1Q86X95 450 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 SLC15A3Q8IY34 581 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 MYO1HQ8N1T3 1032 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 PTGR2Q8N8N7 351 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 OR13C4Q8NGS5 318 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 TRPC4APQ8TEL6 797 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 AUTS2Q8WXX7 1259 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 TFAP2CQ92754 450 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 TMEM125Q96AQ2 219 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 VOPP1Q96AW1 172 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 SEPT5Q99719 369 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 EFHD1Q9BUP0 239 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 GPR62Q9BZJ7 368 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 HEBP1Q9NRV9 189 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 DDX18Q9NVP1 670 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 CMTM6Q9NX76 183 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 VPS9D1Q9Y2B5 631 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 A0A0J9YYE9 177 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 RNF103-CHMP3A0A140T963 221 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 A0A1B0GTL3 188 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 A0A1W2PP18 115 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 SLC38A8A6NNN8 435 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 E2F3O00716 465 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 PIP5K1BO14986 540 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 ACOX3O15254 700 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 CLASP2O75122 1294 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 ESRRBO95718 433 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 SERPINF2P08697 491 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 FAM58BPP0C7Q3 252 aa7.09□□□□□ -1.27
CTNNA1-244ENST00000627109 OR1E1P30953 314 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms