RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 DCUN1D5Q9BTE7 237 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 NPLQ9BXD5 320 aaPredicted RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 TDRD1Q9BXT4 1180 aaKnown RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 CROCCQ5TZA2 2017 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 FAM234BA2RU67 622 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 TYW5A2RUC4 315 aaKnown RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 ACSL4O60488 711 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 VNN2O95498 520 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 LPOP22079 712 aaPredicted RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 ERVPABLB-1P60509 514 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 DUSP4Q13115 394 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 PLCL1Q15111 1095 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 C18orf21Q32NC0 220 aaPredicted RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 AASDHQ4L235 1098 aaPredicted RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 ATP6AP1LQ52LC2 224 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 FAM26DQ5JW98 314 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 ABRAXAS1Q6UWZ7 409 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 GPR180Q86V85 440 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 PAPD5Q8NDF8 572 aaKnown RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 ADAMTS16Q8TE57 1224 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 CHID1Q9BWS9 393 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 CD320Q9NPF0 282 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 RIC8BQ9NVN3 520 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 ZIM2Q9NZV7 527 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 TRIM64A6NGJ6 449 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 UMPSP11172 480 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 CR2P20023 1033 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 YAP1P46937 504 aaKnown RBP11.13□□□□□ -0.63
VARS2-213ENST00000625423 HTR6P50406 440 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 EMX2Q04743 252 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 CRHR2Q13324 411 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 PMS2P3Q13401 168 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 MRPL58Q14197 206 aaKnown RBP11.13□□□□□ -0.63
VARS2-213ENST00000625423 PLA2G4EQ3MJ16 856 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 ACBD5Q5T8D3 534 aaPredicted RBP11.13□□□□□ -0.63
VARS2-213ENST00000625423 LETMD1Q6P1Q0 360 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 SAPCD2Q86UD0 394 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 TTC16Q8NEE8 873 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 SEZ6LQ9BYH1 1024 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 RAI2Q9Y5P3 530 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 KANSL1LA0AUZ9 987 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 E5RI56 91 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 TMX2-CTNND1H3BSU7 103 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 CBX4O00257 560 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 KDELR3O43731 214 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 C7P10643 843 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 HTR1EP28566 365 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 TTPAP49638 278 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 PLIN5Q00G26 463 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 MBTPS1Q14703 1052 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 TGFBIQ15582 683 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 AAK1Q2M2I8 961 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 OTUD3Q5T2D3 398 aaPredicted RBP11.13□□□□□ -0.63
VARS2-213ENST00000625423 GLYATQ6IB77 296 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 CHST15Q7LFX5 561 aaPredicted RBP11.13□□□□□ -0.63
VARS2-213ENST00000625423 PATL1Q86TB9 770 aaKnown RBP11.13□□□□□ -0.63
VARS2-213ENST00000625423 ZFAND4Q86XD8 727 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 HID1Q8IV36 788 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 SFRP1Q8N474 314 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 PPM1MQ96MI6 270 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 LRRC3Q9BY71 257 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 CXorf21Q9HAI6 301 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 AGO1Q9UL18 857 aaKnown RBP11.13□□□□□ -0.63
VARS2-213ENST00000625423 OR6C75A6NL08 312 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 H3BNC9 293 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 SNAP91O60641 907 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 PFDN1O60925 122 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 ENO2P09104 434 aaPredicted RBP11.13□□□□□ -0.63
VARS2-213ENST00000625423 CKBP12277 381 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 CCND3P30281 292 aaPredicted RBP11.13□□□□□ -0.63
VARS2-213ENST00000625423 SGSHP51688 502 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 MTPNP58546 118 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 PRKG2Q13237 762 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 SELPLGQ14242 412 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 TMEM214Q6NUQ4 689 aaKnown RBP11.13□□□□□ -0.63
VARS2-213ENST00000625423 TAS2R42Q7RTR8 314 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 DENND1CQ8IV53 801 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 METTL6Q8TCB7 284 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.13□□□□□ -0.633e-13■■□□□ 12.4
VARS2-213ENST00000625423 PFDN4Q9NQP4 134 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 C8orf4Q9NR00 106 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 VPS9D1Q9Y2B5 631 aa11.13□□□□□ -0.63
VARS2-213ENST00000625423 ARIH1Q9Y4X5 557 aaPredicted RBP11.13□□□□□ -0.63
VARS2-213ENST00000625423 ZFC3H1O60293 1989 aaKnown RBP11.12□□□□□ -0.63
VARS2-213ENST00000625423 ANKRD66B4E2M5 251 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 STX7O15400 261 aaKnown RBP11.12□□□□□ -0.63
VARS2-213ENST00000625423 CAPN1P07384 714 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 ZDHHC11BP0C7U3 371 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 FLT3LGP49771 235 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 CDH4P55283 916 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 NUP107P57740 925 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 NAA20P61599 178 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 C5orf22Q49AR2 442 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 CCSAPQ6IQ19 270 aaPredicted RBP11.12□□□□□ -0.63
VARS2-213ENST00000625423 IL27RAQ6UWB1 636 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 PROSER1Q86XN7 944 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 LRRC43Q8N309 656 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 ISG20Q96AZ6 181 aaKnown RBP11.12□□□□□ -0.63
VARS2-213ENST00000625423 NSMCE2Q96MF7 247 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 ZNF382Q96SR6 550 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms