RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TRIM38O00635 465 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 MRASO14807 208 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 RFPL2O75678 378 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 BCAS2O75934 225 aaPredicted RBP19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 CHEK2O96017 543 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 HGFP14210 728 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 BMPR1AP36894 532 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 RGS4P49798 205 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 ECT2LQ008S8 904 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 RBBP7Q16576 425 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 OGFOD2Q6N063 350 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 MACC1Q6ZN28 852 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 USP45Q70EL2 814 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 FRA10AC1Q70Z53 315 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 NXPE1Q8N323 547 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 MIER2Q8N344 545 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 CLDN19Q8N6F1 224 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 RNF148Q8N7C7 305 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 LKAAEAR1Q8TD35 194 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 ESAMQ96AP7 390 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 ZNF382Q96SR6 550 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 RAD9AQ99638 391 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 HTATIP2Q9BUP3 242 aa19.47■□□□□ 0.71
PCDHB11-202ENST00000624887 BBIP1A8MTZ0 92 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 NEDD8-MDP1E9PL57 170 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 ACOT8O14734 319 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 GIPC1O14908 333 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 SLC25A14O95258 325 aaPredicted RBP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 POP4O95707 220 aaKnown RBP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 RHOP08100 348 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 PRR35P0CG20 571 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 CTNNB1P35222 781 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 CCNHP51946 323 aaPredicted RBP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 PCBP2Q15366 365 aaKnown RBP eCLIP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 GSTA3Q16772 222 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 ARHGAP15Q53QZ3 475 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 CARD16Q5EG05 197 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 ANO7Q6IWH7 933 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 C8orf82Q6P1X6 216 aaPredicted RBP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 IZUMO2Q6UXV1 221 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 GPRIN3Q6ZVF9 776 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 GPR26Q8NDV2 337 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 IRF7Q92985 503 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 MCCC1Q96RQ3 725 aaPredicted RBP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 ECSITQ9BQ95 431 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 BBS2Q9BXC9 721 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 SDR39U1Q9NRG7 319 aaPredicted RBP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 ADA2Q9NZK5 511 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 PSMD13Q9UNM6 376 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 TNPO3Q9Y5L0 923 aaKnown RBP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 ALPK3Q96L96 1907 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 E7ENX8 843 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 LIN7AO14910 233 aaPredicted RBP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 BNIP3LO60238 219 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 MATN4O95460 622 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 PABPC1P11940 636 aaKnown RBP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 ITGB6P18564 788 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 DGKAP23743 735 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 MSX2P35548 267 aaPredicted RBP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 BLMHQ13867 455 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 XKR7Q5GH72 579 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 LRRC66Q68CR7 880 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 ZFP1Q6P2D0 407 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 DPY19L3Q6ZPD9 716 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 GDPD5Q8WTR4 605 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 NAT14Q8WUY8 206 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 POF1BQ8WVV4 589 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 HERVK_113Q902F9 699 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 ZNF641Q96N77 438 aaPredicted RBP19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 VCX3BQ9H321 246 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 PFDN4Q9NQP4 134 aa19.46■□□□□ 0.71
PCDHB11-202ENST00000624887 CASQ2O14958 399 aaPredicted RBP19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 CLGNO14967 610 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 IDO1P14902 403 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 GPRC6AQ5T6X5 926 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 SPATA19Q7Z5L4 167 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 MYO1HQ8N1T3 1032 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 ZNF557Q8N988 423 aaPredicted RBP19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 PDPRQ8NCN5 879 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 SPPL3Q8TCT6 385 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 DLG3Q92796 817 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 ROPN1LQ96C74 230 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 ASB9Q96DX5 294 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 ASIC4Q96FT7 647 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 CCT7Q99832 543 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 ZDHHC6Q9H6R6 413 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 SPAG4Q9NPE6 437 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 TLR9Q9NR96 1032 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 SPHK2Q9NRA0 654 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 SUCOQ9UBS9 1254 aaKnown RBP19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 SLCO3A1Q9UIG8 710 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 SLC4A7Q9Y6M7 1214 aa19.45■□□□□ 0.7
PCDHB11-202ENST00000624887 SOBPA7XYQ1 873 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 TRIM24O15164 1050 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 RAD51BO15315 384 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 FFAR2O15552 330 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 TRIM16O95361 564 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 SYN1P17600 705 aa19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 MRPL19P49406 292 aaKnown RBP19.44■□□□□ 0.7
PCDHB11-202ENST00000624887 PTSQ03393 145 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms