RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 HOXD9P28356 352 aaPredicted RBP17.29■□□□□ 0.36
FAM3A-222ENST00000621967 WEE1P30291 646 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 SLC11A2P49281 568 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 SLC7A2P52569 658 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 LSAMPQ13449 338 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 DENND1CQ8IV53 801 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 CELF5Q8N6W0 485 aaKnown RBP17.29■□□□□ 0.36
FAM3A-222ENST00000621967 PCYOX1LQ8NBM8 494 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 TWIST2Q8WVJ9 160 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 LRTOMTQ8WZ04 291 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 EXT2Q93063 718 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 KIAA1191Q96A73 305 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 EME1Q96AY2 570 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 MGME1Q9BQP7 344 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 MID1IP1Q9NPA3 183 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 A0A0J9YYE9 177 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 PPP6CO00743 305 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 SCAMP3O14828 347 aaKnown RBP17.28■□□□□ 0.36
FAM3A-222ENST00000621967 KERAO60938 352 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 OR6B1O95007 311 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 MATN4O95460 622 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 PSMA3P25788 255 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 ZNF140P52738 457 aaPredicted RBP17.28■□□□□ 0.36
FAM3A-222ENST00000621967 FOXA1P55317 472 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 SH3BGRP55822 239 aaPredicted RBP17.28■□□□□ 0.36
FAM3A-222ENST00000621967 TXNL4AP83876 142 aaKnown RBP17.28■□□□□ 0.36
FAM3A-222ENST00000621967 DYNC1I2Q13409 638 aaKnown RBP17.28■□□□□ 0.36
FAM3A-222ENST00000621967 LEXMQ3ZCV2 418 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 ADAMTS19Q8TE59 1207 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 PBXIP1Q96AQ6 731 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 CDKN2AIPNLQ96HQ2 116 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 NLE1Q9NVX2 485 aaPredicted RBP17.28■□□□□ 0.36
FAM3A-222ENST00000621967 MAP10Q9P2G4 905 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 NDUFAF1Q9Y375 327 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 DOCK8Q8NF50 2099 aa17.28■□□□□ 0.36
FAM3A-222ENST00000621967 C7orf72A4D263 438 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 LRRC14BA6NHZ5 514 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 PIP5K1BO14986 540 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 LAMP2P13473 410 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 PFKFB4Q16877 469 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 SETMARQ53H47 684 aaPredicted RBP17.27■□□□□ 0.36
FAM3A-222ENST00000621967 HMBOX1Q6NT76 420 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 LAYNQ6UX15 382 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 RYBPQ8N488 228 aaPredicted RBP17.27■□□□□ 0.36
FAM3A-222ENST00000621967 METTL25Q8N6Q8 603 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 DGCR14Q96DF8 476 aaKnown RBP17.27■□□□□ 0.36
FAM3A-222ENST00000621967 HOPXQ9BPY8 73 aaPredicted RBP17.27■□□□□ 0.36
FAM3A-222ENST00000621967 DERL2Q9GZP9 239 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 TUBB1Q9H4B7 451 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 COQ10BQ9H8M1 238 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 SYTL2Q9HCH5 934 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 CNOT6Q9ULM6 557 aaKnown RBP17.27■□□□□ 0.36
FAM3A-222ENST00000621967 FAM50BQ9Y247 325 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 MED16Q9Y2X0 877 aa17.27■□□□□ 0.36
FAM3A-222ENST00000621967 KLKB1P03952 638 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 PIRTP0C851 137 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 VIPR2P41587 438 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 RBBP5Q15291 538 aaKnown RBP17.27■□□□□ 0.35
FAM3A-222ENST00000621967 ZNF77Q15935 545 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 PRMT9Q6P2P2 845 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 DHFR2Q86XF0 187 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 MIER2Q8N344 545 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 WBP2Q969T9 261 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 ZUFSPQ96AP4 578 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 NSUN5Q96P11 429 aaKnown RBP17.27■□□□□ 0.35
FAM3A-222ENST00000621967 SLC39A3Q9BRY0 314 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 EFHD1Q9BUP0 239 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 OSBPL11Q9BXB4 747 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 RBM38Q9H0Z9 239 aaKnown RBP17.27■□□□□ 0.35
FAM3A-222ENST00000621967 MAGEH1Q9H213 219 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 SEMA6AQ9H2E6 1030 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 RETREG1Q9H6L5 497 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 ZFP14Q9HCL3 533 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 SDR39U1Q9NRG7 319 aaPredicted RBP17.27■□□□□ 0.35
FAM3A-222ENST00000621967 ARMC1Q9NVT9 282 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 APPL1Q9UKG1 709 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 AGO1Q9UL18 857 aaKnown RBP17.27■□□□□ 0.35
FAM3A-222ENST00000621967 ZNF510Q9Y2H8 683 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 PTGDR2Q9Y5Y4 395 aa17.27■□□□□ 0.35
FAM3A-222ENST00000621967 NME4O00746 187 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 ACSL4O60488 711 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 ETS2P15036 469 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 PSMC3P17980 439 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 CAPN3P20807 821 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 MRPL19P49406 292 aaKnown RBP17.26■□□□□ 0.35
FAM3A-222ENST00000621967 GRB7Q14451 532 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 KIF19Q2TAC6 998 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 MTX3Q5HYI7 312 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 COQ5Q5HYK3 327 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 PTCRAQ6ISU1 281 aaPredicted RBP17.26■□□□□ 0.35
FAM3A-222ENST00000621967 CYP2R1Q6VVX0 501 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 HTR3DQ70Z44 454 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 MINDY1Q8N5J2 469 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 OR2T34Q8NGX1 318 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 OR2T3Q8NH03 318 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 STAG3L4Q8TBR4 150 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 C1QTNF3Q9BXJ4 246 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 TRPV4Q9HBA0 871 aa17.26■□□□□ 0.35
FAM3A-222ENST00000621967 A0A0D9SEW6 157 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 F5H5T6 163 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms