RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 ZNF382Q96SR6 550 aa12.95□□□□□ -0.34
SKP2-209ENST00000620197 BDH2Q9BUT1 245 aa12.95□□□□□ -0.34
SKP2-209ENST00000620197 OSBPL10Q9BXB5 764 aa12.95□□□□□ -0.34
SKP2-209ENST00000620197 AMBRA1Q9C0C7 1298 aa12.95□□□□□ -0.34
SKP2-209ENST00000620197 AKIP1Q9NQ31 210 aa12.95□□□□□ -0.34
SKP2-209ENST00000620197 PKD2L2Q9NZM6 624 aa12.95□□□□□ -0.34
SKP2-209ENST00000620197 A0A1W2PQH9 124 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 CCDC154A6NI56 674 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 GIPC1O14908 333 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 SYNCRIPO60506 623 aaKnown RBP12.94□□□□□ -0.34
SKP2-209ENST00000620197 ZNF623O75123 536 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 RAP2AP10114 183 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 HOXB9P17482 250 aaPredicted RBP12.94□□□□□ -0.34
SKP2-209ENST00000620197 SCNN1GP51170 649 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 CTU2Q2VPK5 515 aaKnown RBP12.94□□□□□ -0.34
SKP2-209ENST00000620197 MRNIPQ6NTE8 343 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 TXNDC11Q6PKC3 985 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 PAQR3Q6TCH7 311 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 EFL1Q7Z2Z2 1120 aaKnown RBP12.94□□□□□ -0.34
SKP2-209ENST00000620197 SFRP1Q8N474 314 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 OR4L1Q8NH43 312 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 IGSF8Q969P0 613 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 PABPC5Q96DU9 382 aaKnown RBP12.94□□□□□ -0.34
SKP2-209ENST00000620197 ZNF583Q96ND8 569 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 C1orf50Q9BV19 199 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 CATSPERZQ9NTU4 200 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.94□□□□□ -0.34
SKP2-209ENST00000620197 ST3GAL5Q9UNP4 418 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 ZNF232Q9UNY5 417 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 SEC24DO94855 1032 aaPredicted RBP12.94□□□□□ -0.34
SKP2-209ENST00000620197 MLYCDO95822 493 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 OXA1LQ15070 435 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 PLCL1Q15111 1095 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 MAPRE1Q15691 268 aaKnown RBP12.94□□□□□ -0.34
SKP2-209ENST00000620197 BROXQ5VW32 411 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 GALNT13Q8IUC8 556 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 SGCDQ92629 289 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 TMBIM1Q969X1 311 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 ZFYVE28Q9HCC9 887 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 GALPQ9UBC7 116 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 PAIP2BQ9ULR5 123 aaKnown RBP12.94□□□□□ -0.34
SKP2-209ENST00000620197 DOLKQ9UPQ8 538 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 CASTOR2A6NHX0 329 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 IFRD1O00458 451 aaPredicted RBP12.94□□□□□ -0.34
SKP2-209ENST00000620197 PRAMEF11O60813 436 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 CHRNA1P02708 482 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 JAK1P23458 1154 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 OXCT1P55809 520 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 PURAQ00577 322 aaKnown RBP12.94□□□□□ -0.34
SKP2-209ENST00000620197 FBXO39Q8N4B4 442 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 OR13C4Q8NGS5 318 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 OR6P1Q8NGX9 317 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 VMP1Q96GC9 406 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 SUSD3Q96L08 255 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 FAM118AQ9NWS6 357 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 PAK1IP1Q9NWT1 392 aaPredicted RBP12.94□□□□□ -0.34
SKP2-209ENST00000620197 GIN1Q9NXP7 522 aa12.94□□□□□ -0.34
SKP2-209ENST00000620197 TRBV5-3A0A0A0MS03 114 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 LSM1O15116 133 aaKnown RBP12.93□□□□□ -0.34
SKP2-209ENST00000620197 MGEA5O60502 916 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 PRSS56P0CW18 603 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 IL1RNP18510 177 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 ITIH1P19827 911 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 TYMPP19971 482 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 AGTR2P50052 363 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 DSC3Q14574 896 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 PARP15Q460N3 678 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 SLC2A7Q6PXP3 512 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 RBM23Q86U06 439 aaKnown RBP12.93□□□□□ -0.34
SKP2-209ENST00000620197 ANKRD13BQ86YJ7 626 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 CHCHD4Q8N4Q1 142 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
SKP2-209ENST00000620197 RHBDF1Q96CC6 855 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 BCL7BQ9BQE9 202 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 PSD2Q9BQI7 771 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 MROQ9BYG7 248 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 ENPP5Q9UJA9 477 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 PCDHGA8Q9Y5G5 932 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 M0QX08 132 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 CDC7O00311 574 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 RSL1D1O76021 490 aaKnown RBP12.93□□□□□ -0.34
SKP2-209ENST00000620197 THRBP10828 461 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 TSNQ15631 228 aaKnown RBP12.93□□□□□ -0.34
SKP2-209ENST00000620197 ANKS6Q68DC2 871 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 TAF2Q6P1X5 1199 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 R3HCC1LQ7Z5L2 792 aaKnown RBP12.93□□□□□ -0.34
SKP2-209ENST00000620197 PLEKHH3Q7Z736 793 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 DPP9Q86TI2 863 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 IGFN1Q86VF2 1251 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 ZNF548Q8NEK5 533 aaPredicted RBP12.93□□□□□ -0.34
SKP2-209ENST00000620197 DDHD1Q8NEL9 900 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 BRI3BPQ8WY22 251 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 MYEOVQ96EZ4 313 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 CDKN2AIPNLQ96HQ2 116 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 MGME1Q9BQP7 344 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 SYTL2Q9HCH5 934 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 SEMA4BQ9NPR2 832 aaPredicted RBP12.93□□□□□ -0.34
SKP2-209ENST00000620197 SELENONQ9NZV5 590 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 TIMM22Q9Y584 194 aa12.93□□□□□ -0.34
SKP2-209ENST00000620197 MRPL42Q9Y6G3 142 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms