RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 OAS3Q9Y6K5 1087 aaKnown RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 TP53BP1Q12888 1972 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ATMQ13315 3056 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 MGAQ8IWI9 3026 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ATRXP46100 2492 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 IGSF10Q6WRI0 2623 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 PRRC2CQ9Y520 2896 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 TLDC2A0PJX2 215 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 TMEM202A6NGA9 273 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 FADS2P1A8MWK0 482 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 CACNB4O00305 520 aaPredicted RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 PRPF4O43172 522 aaKnown RBP eCLIP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 LDB2O43679 373 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 KIF1CO43896 1103 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 SH3BP5O60239 455 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 SNX3O60493 162 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 KCNJ13O60928 360 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 BANF1O75531 89 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 SPAG6O75602 509 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 DCTN3O75935 186 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 FAM155BO75949 473 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 ANXA9O76027 345 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 STK10O94804 968 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 SLC4A1P02730 911 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 PCCBP05166 539 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 FGF1P05230 155 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 PROS1P07225 676 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 CELA2BP08218 269 aaPredicted RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 VIMP08670 466 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 FTH1P19P0C7X4 201 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 PRSS56P0CW18 603 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 HLA-DPA1P20036 260 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 DGKAP23743 735 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 PSMA3P25788 255 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 FDFT1P37268 417 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 SCTRP47872 440 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 POLD2P49005 469 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 ARSDP51689 593 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 ZNF140P52738 457 aaPredicted RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 EPHB1P54762 984 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 KIAA1024LP59773 190 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 CRADDP78560 199 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 XIAPP98170 497 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 PDE1BQ01064 536 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 GPS1Q13098 491 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 LRP8Q14114 963 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 PDE1CQ14123 709 aaPredicted RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 ARHGEF7Q14155 803 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 INPP5AQ14642 412 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 TRADDQ15628 312 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 SKIDA1Q1XH10 827 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 CCDC38Q502W7 563 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 ZNF542PQ5EBM4 170 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 CERCAMQ5T4B2 595 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 ZNF648Q5T619 568 aaPredicted RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 HENMT1Q5T8I9 393 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 LGSNQ5TDP6 509 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 CYB5D1Q6P9G0 228 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 IGF2-ASQ6U949 168 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 Q6ZSR6 202 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 CENPUQ71F23 418 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 KANSL1Q7Z3B3 1105 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 PTAR1Q7Z6K3 402 aaPredicted RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 TRIM74Q86UV6 250 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 EXOC3L1Q86VI1 746 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 CAND1Q86VP6 1230 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 GKN2Q86XP6 184 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 LSMEM2Q8N112 164 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 NAT8LQ8N9F0 302 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 OR13C4Q8NGS5 318 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 GIMAP7Q8NHV1 300 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 BLOC1S5Q8TDH9 187 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 FBF1Q8TES7 1133 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 OR1E3Q8WZA6 343 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 TMEM159Q96B96 161 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 NUS1Q96E22 293 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 RSRC1Q96IZ7 334 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 DNAJC1Q96KC8 554 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 ZNF778Q96MU6 729 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 PWWP2AQ96N64 755 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 TMEM237Q96Q45 408 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 MYCBPQ99417 103 aaPredicted RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 DPYSL5Q9BPU6 564 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 WDR83Q9BRX9 315 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 TRIM56Q9BRZ2 755 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 APOOQ9BUR5 198 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 B3GNT4Q9C0J1 378 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 NRSN2Q9GZP1 204 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 LRRC40Q9H9A6 602 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 RMI1Q9H9A7 625 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 ZFYVE1Q9HBF4 777 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 PLAC1Q9HBJ0 212 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 FGF22Q9HCT0 170 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 SLC40A1Q9NP59 571 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 IL26Q9NPH9 171 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 TXLNGQ9NUQ3 528 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 TRNAU1APQ9NX07 287 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 HACD3Q9P035 362 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 IL17CQ9P0M4 197 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms