RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 COL4A3Q01955 1670 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 H3BMM5 538 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 THRAP10827 490 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 LAMP2P13473 410 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 HLA-EP13747 358 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 PSMC3P17980 439 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 ITGALP20701 1170 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 GJA4P35212 333 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 OPRD1P41143 372 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 POM121L1PQ3SYA9 428 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 YAF2Q8IY57 180 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 KIRREL3Q8IZU9 778 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 STK40Q8N2I9 435 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 CPSF7Q8N684 471 aaKnown RBP11.15□□□□□ -0.62
CPEB1-216ENST00000618449 PPFIBP2Q8ND30 876 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 PBXIP1Q96AQ6 731 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 PTERQ96BW5 349 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 CCDC124Q96CT7 223 aaKnown RBP11.15□□□□□ -0.62
CPEB1-216ENST00000618449 RPP25Q9BUL9 199 aaKnown RBP11.15□□□□□ -0.62
CPEB1-216ENST00000618449 BOCQ9BWV1 1114 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 NDE1Q9NXR1 346 aa11.15□□□□□ -0.62
CPEB1-216ENST00000618449 OAS3Q9Y6K5 1087 aaKnown RBP11.15□□□□□ -0.62
CPEB1-216ENST00000618449 TNRC18O15417 2968 aaPredicted RBP11.15□□□□□ -0.62
CPEB1-216ENST00000618449 KIF26AQ9ULI4 1882 aaPredicted RBP11.15□□□□□ -0.63
CPEB1-216ENST00000618449 ZNF106Q9H2Y7 1883 aaKnown RBP11.14□□□□□ -0.63
CPEB1-216ENST00000618449 TRBV5-4A0A0C4DH59 114 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 ANTXRLA6NF34 631 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 TRPC5OSA6NMA1 111 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 IQCF5A8MTL0 148 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 SDHDO14521 159 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 PRMT5O14744 637 aaPredicted RBP11.14□□□□□ -0.63
CPEB1-216ENST00000618449 MAP3K7O43318 606 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 IPO13O94829 963 aaKnown RBP11.14□□□□□ -0.63
CPEB1-216ENST00000618449 SORBS2O94875 1100 aaKnown RBP11.14□□□□□ -0.63
CPEB1-216ENST00000618449 ESR1P03372 595 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 C1SP09871 688 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 HNRNPLP14866 589 aaKnown RBP eCLIP11.14□□□□□ -0.63
CPEB1-216ENST00000618449 RPS6KA3P51812 740 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 HERC3Q15034 1050 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 EIF4HQ15056 248 aaKnown RBP11.14□□□□□ -0.63
CPEB1-216ENST00000618449 FNDC3BQ53EP0 1204 aaKnown RBP11.14□□□□□ -0.63
CPEB1-216ENST00000618449 TMEM198Q66K66 360 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 CAPRIN2Q6IMN6 1127 aaKnown RBP11.14□□□□□ -0.63
CPEB1-216ENST00000618449 CPA6Q8N4T0 437 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 TERB1Q8NA31 727 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 SIDT2Q8NBJ9 832 aaKnown RBP11.14□□□□□ -0.63
CPEB1-216ENST00000618449 CHFRQ96EP1 664 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 LRIG1Q96JA1 1093 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 MARK4Q96L34 752 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 SYTL2Q9HCH5 934 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 PPM1HQ9ULR3 514 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 TSPAN11A1L157 253 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 RGSL1A5PLK6 1076 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 TBC1D3BA6NDS4 549 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 VPS26AO75436 327 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 PYGLP06737 847 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 CD1EP15812 388 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 TIMP2P16035 220 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 CHRM3P20309 590 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 ACRV1P26436 265 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 ADSLP30566 484 aaPredicted RBP11.14□□□□□ -0.63
CPEB1-216ENST00000618449 NUDT2P50583 147 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 CCNIQ14094 377 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 ZNF805Q5CZA5 627 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 AAGABQ6PD74 315 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 SLC22A9Q8IVM8 553 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 FBXW8Q8N3Y1 598 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 AFAP1L2Q8N4X5 818 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 JADE3Q92613 823 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 KCNJ9Q92806 393 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 ELSPBP1Q96BH3 223 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 FAR2Q96K12 515 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 PCDH12Q9NPG4 1184 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 CLDND1Q9NY35 253 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 CRLS1Q9UJA2 301 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 SARDHQ9UL12 918 aa11.14□□□□□ -0.63
CPEB1-216ENST00000618449 C16orf96A6NNT2 1141 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 AGAP14A8MT82 685 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 UPK3BL1B0FP48 263 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 E5RI56 91 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 UPK3BL2E5RIL1 263 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 LIN7AO14910 233 aaPredicted RBP11.13□□□□□ -0.63
CPEB1-216ENST00000618449 ZNF7P17097 686 aaPredicted RBP11.13□□□□□ -0.63
CPEB1-216ENST00000618449 CD9P21926 228 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 GDI1P31150 447 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 SPINT3P49223 89 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 PTPN5P54829 565 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 CYLC2Q14093 348 aaPredicted RBP11.13□□□□□ -0.63
CPEB1-216ENST00000618449 ARHGEF7Q14155 803 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 ZNF234Q14588 700 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 HNRNPA1L2Q32P51 320 aaKnown RBP11.13□□□□□ -0.63
CPEB1-216ENST00000618449 GPR33Q49SQ1 333 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 HPS6Q86YV9 775 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 RBFAQ8N0V3 343 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 CLDN19Q8N6F1 224 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 RP9Q8TA86 221 aaKnown RBP11.13□□□□□ -0.63
CPEB1-216ENST00000618449 CD200R1Q8TD46 325 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 MAELQ96JY0 434 aaKnown RBP11.13□□□□□ -0.63
CPEB1-216ENST00000618449 TTC1Q99614 292 aa11.13□□□□□ -0.63
CPEB1-216ENST00000618449 EML4Q9HC35 981 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms