RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CCDC120Q96HB5 630 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 LGR4Q9BXB1 951 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 ABCG8Q9H221 673 aa14.91□□□□□ -0.02
COL5A1-208ENST00000618395 SAGP10523 405 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 CBWD6Q4V339 395 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 BEND5Q7L4P6 421 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 SH3RF3Q8TEJ3 882 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 PPM1MQ96MI6 270 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 RAD9AQ99638 391 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 PPIL3Q9H2H8 161 aaKnown RBP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 RBM22Q9NW64 420 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 PNPP00491 289 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 BPGMP07738 259 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 CDH5P33151 784 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 UGT8Q16880 541 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 DCST1Q5T197 706 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 LRRC19Q9H756 370 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 TTC37Q6PGP7 1564 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 SLC12A3P55017 1021 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 PTGR1Q14914 329 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 C2orf76Q3KRA6 126 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 REP15Q6BDI9 236 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 NLGN1Q8N2Q7 840 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 IL17REQ8NFR9 667 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 TRUB1Q8WWH5 349 aaKnown RBP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 PMM1Q92871 262 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 TREX2Q9BQ50 279 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 ACTR6Q9GZN1 396 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 MROH8Q9H579 483 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 SEC14L3Q9UDX4 400 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 USP20Q9Y2K6 914 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF208O43345 1280 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 OR56A5P0C7T3 313 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 PNPLA4P41247 253 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 PRKAG1P54619 331 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 ERVK-25P63136 954 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 TAGLNQ01995 201 aaKnown RBP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 KCTD19Q17RG1 926 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 HDAC10Q969S8 669 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 DPCDQ9BVM2 203 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 MTMR12Q9C0I1 747 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 C11orf16Q9NQ32 467 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 CASC3O15234 703 aaKnown RBP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 WDPCPO95876 746 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 PAEPP09466 180 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 CHRM1P11229 460 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-208ENST00000618395 GTF2F2P13984 249 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 UQCRC1P31930 480 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 SCGB2B2Q4G0G5 96 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 AZIN1O14977 448 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 BAG6P46379 1132 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 HUNKP57058 714 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 FSTL1Q12841 308 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 QRICH1Q2TAL8 776 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 DCST2Q5T1A1 773 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 HLA-DQA1Q5Y7H0 255 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 PLEKHA1Q9HB21 404 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 FOLH1BQ9HBA9 442 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 IKZF2Q9UKS7 526 aa14.9□□□□□ -0.02
COL5A1-208ENST00000618395 SLC22A2O15244 555 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 ITGB6P18564 788 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 KLHL26Q53HC5 615 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 TMED4Q7Z7H5 227 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 NKAPQ8N5F7 415 aaKnown RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 C1orf216Q8TAB5 229 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 STON2Q8WXE9 905 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 REEP4Q9H6H4 257 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 INTS7Q9NVH2 962 aaKnown RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 PNPOQ9NVS9 261 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 USP21Q9UK80 565 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 CPSF1Q10570 1443 aaKnown RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 OR6C65A6NJZ3 312 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 ATP6AP2O75787 350 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 SLC34A2O95436 690 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 CPN2P22792 545 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 DGKAP23743 735 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 C16orf86Q6ZW13 317 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 ZNF347Q96SE7 839 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 RPL22P35268 128 aaKnown RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 MARC1Q5VT66 337 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 PLEKHG7Q6ZR37 379 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 HPSEQ9Y251 543 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 F5H0A9 414 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 HCN1O60741 890 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 IRF1P10914 325 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 MAGEB1P43366 347 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 TMEM143Q96AN5 459 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 ZNF486Q96H40 463 aaPredicted RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 PIN4Q9Y237 131 aaKnown RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 TPH1P17752 444 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 CCR1P32246 355 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 DNASE1L1P49184 302 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 CNDP2Q96KP4 475 aaKnown RBP14.89□□□□□ -0.03
COL5A1-208ENST00000618395 KXD1Q9BQD3 176 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 ARL6Q9H0F7 186 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 RYKP34925 604 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 XKR3Q5GH77 459 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 NT5DC1Q5TFE4 455 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 SPATA6LQ8N4H0 392 aa14.89□□□□□ -0.03
COL5A1-208ENST00000618395 OR10H4Q8NGA5 316 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms