RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 MMP12P39900 470 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 RPL14P50914 215 aaKnown RBP20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 IRX1P78414 480 aaPredicted RBP20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 NFKB2Q00653 900 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 FBXO48Q5FWF7 155 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 KDM1BQ8NB78 822 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 RILPQ96NA2 401 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 DNAJC28Q9NX36 388 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 EDDM13A0A1B0GTR0 161 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 BTN3A1O00481 513 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 UBFD1O14562 309 aaKnown RBP20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 KERAO60938 352 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 SKAP2O75563 359 aaPredicted RBP20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 KAT7O95251 611 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ZNF30P17039 623 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 IMPDH1P20839 514 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 IL2P60568 153 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 KLC1Q07866 573 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 UNC50Q53HI1 259 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ZNF678Q5SXM1 525 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 EPGNQ6UW88 154 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 SERPINA13PQ6UXR4 307 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 DPPA4Q7L190 304 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 TREML1Q86YW5 311 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 NKAPQ8N5F7 415 aaKnown RBP20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PTGR2Q8N8N7 351 aaPredicted RBP20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 CCDC126Q96EE4 140 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 L3HYPDHQ96EM0 354 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 MSLNLQ96KJ4 702 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 SIKE1Q9BRV8 207 aa20.37■□□□□ 0.85
CNTNAP3B-212ENST00000617422 CYP2A6P11509 494 aaPredicted RBP20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 HK3P52790 923 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PRKAA1Q13131 559 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PFKFB4Q16877 469 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 CFAP157Q5JU67 520 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 EGFLAMQ63HQ2 1017 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 MACC1Q6ZN28 852 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 FRMD7Q6ZUT3 714 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 SLC22A9Q8IVM8 553 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PIP4K2CQ8TBX8 421 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 STMN2Q93045 179 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 CNDP1Q96KN2 507 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PPP1R36Q96LQ0 422 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 CACNA2D2Q9NY47 1150 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 TAS2R1Q9NYW7 299 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 GNPTGQ9UJJ9 305 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PPP6CO00743 305 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 SLC25A14O95258 325 aaPredicted RBP20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 TRIM16O95361 564 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ALDH18A1P54886 795 aaKnown RBP20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ATP6V0D1P61421 351 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 SLC34A1Q06495 639 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ASPHQ12797 758 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ADGRE1Q14246 886 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 RCN1Q15293 331 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 LYPLAL1Q5VWZ2 237 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 RINLQ6ZS11 566 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 STAG3L4Q8TBR4 150 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 HCAR2Q8TDS4 363 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 NMRK1Q9NWW6 199 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ZDHHC3Q9NYG2 299 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PKD2L2Q9NZM6 624 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 RNF112Q9ULX5 631 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ATG2BQ96BY7 2078 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 TICRRQ7Z2Z1 1910 aa20.36■□□□□ 0.85
CNTNAP3B-212ENST00000617422 IGLV3-16A0A075B6K0 115 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 CAPN14A8MX76 684 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 F8W8V4 182 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 MTX2O75431 263 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PSMG1O95456 288 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 HERVK_113P63132 956 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 UBAP2LQ14157 1087 aaKnown RBP20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 KPNB1Q14974 876 aaKnown RBP20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ACSBG2Q5FVE4 666 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 GPRC6AQ5T6X5 926 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 IRGCQ6NXR0 463 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 LIPIQ6XZB0 460 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 TECPR1Q7Z6L1 1165 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 NSUN5Q96P11 429 aaKnown RBP20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 OR52B2Q96RD2 323 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 SPATA16Q9BXB7 569 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ERVK-6Q9BXR3 956 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 FAM83DQ9H4H8 585 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 WDR55Q9H6Y2 383 aaPredicted RBP20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 THAP10Q9P2Z0 257 aaPredicted RBP20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 LRCH1Q9Y2L9 728 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 MTCH2Q9Y6C9 303 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 FADS2P1A8MWK0 482 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 MAGEC1O60732 1142 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 SMIM24O75264 130 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PRNPP04156 253 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PPARGP37231 505 aaPredicted RBP20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 CDH13P55290 713 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ELAVL3Q14576 367 aaKnown RBP20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 EZH1Q92800 747 aaPredicted RBP20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 TTC1Q99614 292 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 COPS8Q99627 209 aa20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 WRAP53Q9BUR4 548 aaKnown RBP20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 RIOK2Q9BVS4 552 aaKnown RBP20.35■□□□□ 0.85
CNTNAP3B-212ENST00000617422 TRMT61BQ9BVS5 477 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms