RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CEP44Q9C0F1 390 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 SYTL2Q9HCH5 934 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 MID1IP1Q9NPA3 183 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 CD274Q9NZQ7 290 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 MID2Q9UJV3 735 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 APPL1Q9UKG1 709 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 FRYLO94915 3013 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 K7ESM1 405 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 GYG2O15488 501 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 SMIM24O75264 130 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 TBX10O75333 385 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 ESR1P03372 595 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 PYGLP06737 847 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 EPHX1P07099 455 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 PSMA3P25788 255 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 AKT1P31749 480 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 IL12RB1P42701 662 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 KPNA2P52292 529 aaKnown RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 NME5P56597 212 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 RPL26P61254 145 aaKnown RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 HERVK_113P63132 956 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 BTKQ06187 659 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 PRKAA1Q13131 559 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 GRAMD4Q6IC98 578 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 ANKRD54Q6NXT1 300 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 FRMD7Q6ZUT3 714 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 FBXO39Q8N4B4 442 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 LILRA3Q8N6C8 439 aaPredicted RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 RBM15BQ8NDT2 890 aaKnown RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 KCNJ9Q92806 393 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 KIAA1191Q96A73 305 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 ZNF641Q96N77 438 aaPredicted RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 MCCC1Q96RQ3 725 aaPredicted RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 TUBGCP5Q96RT8 1024 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 ERVK-6Q9BXR3 956 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 DERL2Q9GZP9 239 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 ZBTB26Q9HCK0 441 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 KLC4Q9NSK0 619 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 RPL26L1Q9UNX3 145 aaKnown RBP7.7□□□□□ -1.18
NEK3-207ENST00000617054 BTRCQ9Y297 605 aa7.7□□□□□ -1.18
NEK3-207ENST00000617054 TMEM202A6NGA9 273 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 FADS2P1A8MWK0 482 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 C9JVG2 144 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 CDK14O94921 469 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 NFATC1O95644 943 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 OPRD1P41143 372 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 POLR2LP62875 67 aaKnown RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 MXRA7P84157 204 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 RUNX3Q13761 415 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 BOP1Q14137 746 aaKnown RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 ACOX1Q15067 660 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 TGFBIQ15582 683 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 PHKG1Q16816 387 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 PUS10Q3MIT2 529 aaKnown RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 ZNF805Q5CZA5 627 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 AARS2Q5JTZ9 985 aaKnown RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 TCHHL1Q5QJ38 904 aaPredicted RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 C9orf64Q5T6V5 341 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 EGFLAMQ63HQ2 1017 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 VRK3Q8IV63 474 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 RBFAQ8N0V3 343 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.69□□□□□ -1.18
NEK3-207ENST00000617054 CNDP1Q96KN2 507 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 LENG8Q96PV6 779 aaPredicted RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 PLEKHG4BQ96PX9 1271 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 LATS2Q9NRM7 1088 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 DNAJC28Q9NX36 388 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 CDH7Q9ULB5 785 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 SLC8A2Q9UPR5 921 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 TRAF6Q9Y4K3 522 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 H3BQ06 376 aaPredicted RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 PFDN6O15212 129 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 HOXC11O43248 304 aaPredicted RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 MMP20O60882 483 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 KATNA1O75449 491 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 PTPN4P29074 926 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 CCR7P32248 378 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 DMC1Q14565 340 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 SLC44A4Q53GD3 710 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 ATAT1Q5SQI0 421 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 GPRC6AQ5T6X5 926 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 LCA5Q86VQ0 697 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 GPSM1Q86YR5 675 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 YAF2Q8IY57 180 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 OR52B6Q8NGF0 335 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 PIP4K2CQ8TBX8 421 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 LYSMD1Q96S90 227 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 SLC2A11Q9BYW1 496 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 SLC6A17Q9H1V8 727 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 FAM83DQ9H4H8 585 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 TFB2MQ9H5Q4 396 aaKnown RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 NSUN3Q9H649 340 aaKnown RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 EIF2B4Q9UI10 523 aaKnown RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 COLQQ9Y215 455 aaPredicted RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 DHRS7Q9Y394 339 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 PRR23AA6NEV1 266 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 UPK3BL1B0FP48 263 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 UPK3BL2E5RIL1 263 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 CCDC22O60826 627 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 KERAO60938 352 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms