RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 ZDHHC15Q96MV8 337 aa13.89□□□□□ -0.19
TNFRSF11A-205ENST00000616710 MTMR10Q9NXD2 777 aa13.89□□□□□ -0.19
TNFRSF11A-205ENST00000616710 GMIPQ9P107 970 aa13.89□□□□□ -0.19
TNFRSF11A-205ENST00000616710 COL4A1P02462 1669 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 SH3BGRLO75368 114 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 KCNK2O95069 426 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 AP2A1O95782 977 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 PSKH1P11801 424 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 ZNF135P52742 658 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 MAPK12P53778 367 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 RBM48Q5RL73 367 aaKnown RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 CCDC149Q6ZUS6 474 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 STRADAQ7RTN6 431 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 CHDHQ8NE62 594 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 RHOXF1Q8NHV9 184 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 FAM120BQ96EK7 910 aaKnown RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 DPEP3Q9H4B8 488 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 MAP10Q9P2G4 905 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 AFF4Q9UHB7 1163 aaKnown RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 LEF1Q9UJU2 399 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 EIF3LQ9Y262 564 aaKnown RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 SLIT2O94813 1529 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 PRMT5O14744 637 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 CILPO75339 1184 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 POU4F1Q01851 419 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 IL27RAQ6UWB1 636 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 HID1Q8IV36 788 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 FUNDC1Q8IVP5 155 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 SLC44A2Q8IWA5 706 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 AURKBQ96GD4 344 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 UCK2Q9BZX2 261 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 CPNE5Q9HCH3 593 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 RBM22Q9NW64 420 aaKnown RBP eCLIP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 PRRC2BQ5JSZ5 2229 aaKnown RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 YBX3P16989 372 aaKnown RBP eCLIP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 ACADSBP45954 432 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 NDUFV1P49821 464 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 POLR2JP52435 117 aaKnown RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 BTBD8Q5XKL5 378 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 ADHFE1Q8IWW8 467 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 PHACTR4Q8IZ21 702 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 PTCD2Q8WV60 388 aaKnown RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 QTRT2Q9H974 415 aaKnown RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 POLR3BQ9NW08 1133 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 PLCH1Q4KWH8 1693 aa13.88□□□□□ -0.19
TNFRSF11A-205ENST00000616710 CNTRLQ7Z7A1 2325 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 ZCWPW2A0A1B0GU75 182 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 CENPBD1B2RD01 187 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 SMLR1H3BR10 107 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 DLGAP1O14490 977 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 SLC22A2O15244 555 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 PLOD3O60568 738 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 RHOBTB1O94844 696 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 GUCA1CO95843 209 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 ITGBL1O95965 494 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 VTNP04004 478 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 GP2P55259 537 aaKnown RBP13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 ABATP80404 500 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 DPY19L3Q6ZPD9 716 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 FBXO39Q8N4B4 442 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 SPERTQ8NA61 448 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 METTL6Q8TCB7 284 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 REXO5Q96IC2 774 aaKnown RBP13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 GPR22Q99680 433 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 MRPL9Q9BYD2 267 aaKnown RBP13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 UTS2RQ9UKP6 389 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 CTDSP2O14595 271 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 ALDH1A2O94788 518 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 C1RP00736 705 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 POU2F1P14859 743 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 EFNA1P20827 205 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 CNTN2Q02246 1040 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 PRKG2Q13237 762 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 FSCN1Q16658 493 aaKnown RBP13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 BTBD16Q32M84 506 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 XAF1Q6GPH4 301 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 EFCAB12Q6NXP0 572 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 PAMR1Q6UXH9 720 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 REM2Q8IYK8 340 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 FAM86B1Q8N7N1 296 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 GRPEL2Q8TAA5 225 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 GPR78Q96P69 363 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 NEDD4LQ96PU5 975 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 APOL4Q9BPW4 351 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 ELOVL6Q9H5J4 265 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 FAM8A1Q9UBU6 413 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 ZNF451Q9Y4E5 1061 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 ROBO1Q9Y6N7 1651 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 TREHO43280 583 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 LYPLA2O95372 231 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 AXLP30530 894 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 CCR1P32246 355 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 PPP2R2BQ00005 443 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 STXBP2Q15833 593 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 TIGD6Q17RP2 521 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 CACHD1Q5VU97 1274 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 AGAP6Q5VW22 663 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 NXNL2Q5VZ03 156 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 FAM131AQ6UXB0 335 aa13.87□□□□□ -0.19
TNFRSF11A-205ENST00000616710 SLC22A9Q8IVM8 553 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms