RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SLC29A1Q99808 456 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 TDRD1Q9BXT4 1180 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 LRRC3Q9BY71 257 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 INTS10Q9NVR2 710 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 IMPAD1Q9NX62 359 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 GALNT8Q9NY28 637 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 USE1Q9NZ43 259 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 MAGEL2Q9UJ55 1249 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 YIPF1Q9Y548 306 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 MYOCOSA0A1B0GUC4 107 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 FFAR2O15552 330 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 LDB2O43679 373 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 HS6ST1O60243 411 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 GJB5O95377 273 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 CPSF4O95639 269 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SPATA31D3P0C874 917 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 MTHFD1P11586 935 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 ALOX15P16050 662 aaPredicted RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 IDH2P48735 452 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 POLR2JP52435 117 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 DNAJB13P59910 316 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 TLR1Q15399 786 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 ABRAXAS1Q6UWZ7 409 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SPATA31D4Q6ZUB0 917 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 RHEBL1Q8TAI7 183 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLC45A3Q96JT2 553 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 TMEM74Q96NL1 305 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 PANX1Q96RD7 426 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 DYRK4Q9NR20 520 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SDR39U1Q9NRG7 319 aaPredicted RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 IRAK4Q9NWZ3 460 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 A0A1B0GUL6 1792 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 NPEPPSL1A6NEC2 478 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 GALNT1Q10472 559 aaPredicted RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SIM2Q14190 667 aaPredicted RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 MORN1Q5T089 497 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 INTS11Q5TA45 600 aaKnown RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 MAVSQ7Z434 540 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 NECAB2Q7Z6G3 386 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SATL1Q86VE3 508 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 ADHFE1Q8IWW8 467 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 DDHD1Q8NEL9 900 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 GANCQ8TET4 914 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 LRRC58Q96CX6 371 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 MYO19Q96H55 970 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLC39A13Q96H72 371 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 FAM83DQ9H4H8 585 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 BRD9Q9H8M2 597 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 HPS4Q9NQG7 708 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 TREX1Q9NSU2 369 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 PTTG2Q9NZH5 202 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 IL17CQ9P0M4 197 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 ACTR3BQ9P1U1 418 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 NOTCH2Q04721 2471 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 GLYATL1P3A0A0U1RQE8 302 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 H3BNX3 289 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 FTH1P02794 183 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CKBP12277 381 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CAPN3P20807 821 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 GSSP48637 474 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 MTPNP58546 118 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 PLEKHG6Q3KR16 790 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 PDSS2Q86YH6 399 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SYT12Q8IV01 421 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR52B6Q8NGF0 335 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR10A6Q8NH74 314 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 DACH2Q96NX9 599 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 BBS2Q9BXC9 721 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 LRTM1Q9HBL6 345 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 TBC1D30Q9Y2I9 924 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SQORQ9Y6N5 450 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 DDX60Q8IY21 1712 aaKnown RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 KIAA1551Q9HCM1 1747 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLC38A8A6NNN8 435 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 BCL10O95999 233 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CYBAP13498 195 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 POU1F1P28069 291 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 MZF1P28698 734 aaPredicted RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 GRIK2Q13002 908 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 STARD3Q14849 445 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 GPR33Q49SQ1 333 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF678Q5SXM1 525 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CES4AQ5XG92 561 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 ERMP1Q7Z2K6 904 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 KLHDC9Q8NEP7 349 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 TSPEARQ8WU66 669 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 RORBQ92753 470 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 ISL2Q96A47 359 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CDK15Q96Q40 435 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SMIM14Q96QK8 99 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 DGCR6LQ9BY27 220 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 OSBPL6Q9BZF3 934 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 MRPL17Q9NRX2 175 aaKnown RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 CFAP97Q9P2B7 532 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 KIF17Q9P2E2 1029 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SUCOQ9UBS9 1254 aaKnown RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 POLR3HQ9Y535 204 aaPredicted RBP5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 SPO11Q9Y5K1 396 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 NAV1Q8NEY1 1877 aa5.57□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF840PA6NDX5 716 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms