RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 TREX1Q9NSU2 369 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 FADS3Q9Y5Q0 445 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 CCDC189A1A4V9 331 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 GJB5O95377 273 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 ALPIP09923 528 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 NCK1P16333 377 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 RPL26P61254 145 aaKnown RBP13.88□□□□□ -0.19
SSBP2-220ENST00000615665 MRPS15P82914 257 aaKnown RBP13.88□□□□□ -0.19
SSBP2-220ENST00000615665 EPS8Q12929 822 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 UNC50Q53HI1 259 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 TTC23Q5W5X9 447 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 SPESP1Q6UW49 350 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 CLEC14AQ86T13 490 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 SATL1Q86VE3 508 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 CNTN4Q8IWV2 1026 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 C8orf59Q8N0T1 100 aaPredicted RBP13.88□□□□□ -0.19
SSBP2-220ENST00000615665 LRRC58Q96CX6 371 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 C8orf4Q9NR00 106 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 AQP12BA6NM10 295 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 WASH4PA8MWX3 477 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 MAN1A2O60476 641 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 EPN2O95208 641 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 NRG1Q02297 640 aaPredicted RBP13.88□□□□□ -0.19
SSBP2-220ENST00000615665 CCDC85BQ15834 202 aaPredicted RBP13.88□□□□□ -0.19
SSBP2-220ENST00000615665 AQP12AQ8IXF9 295 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 YAF2Q8IY57 180 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 SORBS2O94875 1100 aaKnown RBP13.88□□□□□ -0.19
SSBP2-220ENST00000615665 UMPSP11172 480 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 ALOX15P16050 662 aaPredicted RBP13.88□□□□□ -0.19
SSBP2-220ENST00000615665 NUDT18Q6ZVK8 323 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 ADCK1Q86TW2 530 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 GPR180Q86V85 440 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
SSBP2-220ENST00000615665 ANKRD49Q8WVL7 239 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 SPATA17Q96L03 361 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 ZCCHC2Q9C0B9 1178 aaKnown RBP13.88□□□□□ -0.19
SSBP2-220ENST00000615665 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.88□□□□□ -0.19
SSBP2-220ENST00000615665 FAM234BA2RU67 622 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 IFRD1O00458 451 aaPredicted RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 FFAR2O15552 330 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 CST1P01037 141 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 CKMT2P17540 419 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 IFNA8P32881 189 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 ATP4BP51164 291 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 CAMK2GQ13555 558 aaPredicted RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 SULT1C3Q6IMI6 304 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 TRMT11Q7Z4G4 463 aaKnown RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 TRPV1Q8NER1 839 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 RHEBL1Q8TAI7 183 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 RPL10LQ96L21 214 aaKnown RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 RTP3Q9BQQ7 232 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 SEZ6LQ9BYH1 1024 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 OSBPL6Q9BZF3 934 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 MTIF3Q9H2K0 278 aaKnown RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 RSL24D1Q9UHA3 163 aaKnown RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 COCHO43405 550 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 CDK14O94921 469 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 FTH1P02794 183 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 FDXRP22570 491 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 TTKP33981 857 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 C16orf72Q14CZ0 275 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 RTP2Q5QGT7 225 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 SNX20Q7Z614 316 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 ATL1Q8WXF7 558 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 NSUN5Q96P11 429 aaKnown RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 TSSK3Q96PN8 268 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 RBBP6Q7Z6E9 1792 aaKnown RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 ABCB1P08183 1280 aaPredicted RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 RPIAP49247 311 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 ACADVLP49748 655 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 DMC1Q14565 340 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 SETMARQ53H47 684 aaPredicted RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 STARD8Q92502 1023 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 POLR1BQ9H9Y6 1135 aa13.87□□□□□ -0.19
SSBP2-220ENST00000615665 PNMA8BQ9ULN7 279 aaPredicted RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 POLR2AP24928 1970 aaKnown RBP13.87□□□□□ -0.19
SSBP2-220ENST00000615665 LINC00854A0A1B0GVQ3 168 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 AOC2O75106 756 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 LRATO95237 230 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 CHI3L1P36222 383 aaPredicted RBP13.86□□□□□ -0.19
SSBP2-220ENST00000615665 TRPC1P48995 793 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 ECT2LQ008S8 904 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 POM121L1PQ3SYA9 428 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 CCDC92Q53HC0 331 aaPredicted RBP13.86□□□□□ -0.19
SSBP2-220ENST00000615665 ISCA2Q86U28 154 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 RAD18Q9NS91 495 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 TMEM30AQ9NV96 361 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 ADGRE2Q9UHX3 823 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 NEDD8-MDP1E9PL57 170 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 GRM6O15303 877 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 CLDN9O95484 217 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 UGT1A6P19224 532 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 UGT1A1P22309 533 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 UGT1A4P22310 534 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 UGT1A3P35503 534 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 UGT1A5P35504 534 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 PLD3Q8IV08 490 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 ZNF461Q8TAF7 563 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 ACDQ96AP0 544 aa13.86□□□□□ -0.19
SSBP2-220ENST00000615665 ITCHQ96J02 903 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms