RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 MARCH4Q9P2E8 410 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P24-202ENST00000615653 CNOT7Q9UIV1 285 aaKnown RBP2.63□□□□□ -1.99
HMGB1P24-202ENST00000615653 EXOC7Q9UPT5 735 aa2.63□□□□□ -1.99
HMGB1P24-202ENST00000615653 CHKBQ9Y259 395 aa2.63□□□□□ -1.99
HMGB1P24-202ENST00000615653 WDR37Q9Y2I8 494 aa2.63□□□□□ -1.99
HMGB1P24-202ENST00000615653 TMED5Q9Y3A6 229 aa2.63□□□□□ -1.99
HMGB1P24-202ENST00000615653 CCL27Q9Y4X3 112 aa2.63□□□□□ -1.99
HMGB1P24-202ENST00000615653 POMT1Q9Y6A1 747 aa2.63□□□□□ -1.99
HMGB1P24-202ENST00000615653 RAD54L2Q9Y4B4 1467 aa2.63□□□□□ -1.99
HMGB1P24-202ENST00000615653 IGLV5-37A0A075B6J1 123 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 TRAV34A0A0B4J273 112 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 SYCE3A1L190 88 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 RGSL1A5PLK6 1076 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 LRRIQ4A6NIV6 560 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 SRRM3A6NNA2 597 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 ERI2A8K979 691 aaKnown RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 AGAP14A8MT82 685 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 STX16-NPEPL1H3BU86 382 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 STX16O14662 325 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 WNT9BO14905 357 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 ZNF263O14978 683 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 CTAGE5O15320 804 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 KINO60870 393 aaKnown RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 PEX11AO75192 247 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 DAB1O75553 588 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 MTRF1O75570 445 aaKnown RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 TRIM16O95361 564 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 ADCY5O95622 1261 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 ZBTB11O95625 1053 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 CH25HO95992 272 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 TPM1P09493 284 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 CNPP09543 421 aaKnown RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 PTPN2P17706 415 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 TYMPP19971 482 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 CD9P21926 228 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 ITGB8P26012 769 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 FMO4P31512 558 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 BSGP35613 385 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 HNF1BP35680 557 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 MTHFRP42898 656 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 MTIF2P46199 727 aaKnown RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 PIP4K2AP48426 406 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 BLKP51451 505 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 CLCN5P51795 746 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 SLC12A3P55017 1021 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 RPS3AP61247 264 aaKnown RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 BNC1Q01954 994 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 MECOMQ03112 1051 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 AIMP2Q13155 320 aaKnown RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 SNTA1Q13424 505 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 CAMK2DQ13557 499 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 PTK6Q13882 451 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 RCN2Q14257 317 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 NFE2L1Q14494 772 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 LPIN1Q14693 890 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 SLC39A14Q15043 492 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 INAQ16352 499 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 ZNF672Q499Z4 452 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 BOLA3Q53S33 107 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 XKR9Q5GH70 373 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 GLRA4Q5JXX5 417 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 CCDC122Q5T0U0 273 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 ERMARDQ5T6L9 678 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 FAM69AQ5T7M9 428 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 TYW3Q6IPR3 259 aaKnown RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 INO80CQ6PI98 192 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 IL20RBQ6UXL0 311 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 MSANTD1Q6ZTZ1 278 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 C15orf52Q6ZUT6 534 aaKnown RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 CACNA2D4Q7Z3S7 1137 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 RFLNBQ8N5W9 214 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 AADATQ8N5Z0 425 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 GMCL1P1Q8NEA9 526 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 DNAAF1Q8NEP3 725 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 METTL6Q8TCB7 284 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 TRIB2Q92519 343 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 PGAP3Q96FM1 320 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 APOPT1Q96IL0 206 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 ADGRG7Q96K78 797 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 LBHD1Q9BQE6 289 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 TBCDQ9BTW9 1192 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 STMN4Q9H169 189 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 IL25Q9H293 177 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 NDST4Q9H3R1 872 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 RWDD1Q9H446 243 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 SH2D4AQ9H788 454 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 TCP11L1Q9NUJ3 509 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 ABCB8Q9NUT2 735 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 GIMAP4Q9NUV9 329 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 ANO10Q9NW15 660 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 HDAC6Q9UBN7 1215 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 SEC63Q9UGP8 760 aaKnown RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 IL19Q9UHD0 177 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 PPIEQ9UNP9 301 aaKnown RBP2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 ITM2BQ9Y287 266 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 JRKLQ9Y4A0 524 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 PSAT1Q9Y617 370 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 NFS1Q9Y697 457 aa2.62□□□□□ -1.99
HMGB1P24-202ENST00000615653 EIF4G1Q04637 1599 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 327.2 ms