RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 PSMG2Q969U7 264 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 PHF21AQ96BD5 680 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 C9orf16Q9BUW7 83 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 CLCA2Q9UQC9 943 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 N6AMT1Q9Y5N5 214 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 TBC1D3BA6NDS4 549 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 CCL16O15467 120 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 CLOCKO15516 846 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 DCXO43602 365 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 HLA-DQB2P05538 268 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 ANGPT1Q15389 498 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 ANXA8L1Q5VT79 327 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 STEAP4Q687X5 459 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 TXNRD3NBQ6F5E7 133 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SULT1C3Q6IMI6 304 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 FBXL22Q6P050 247 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 R3HCC1LQ7Z5L2 792 aaKnown RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 ASZ1Q8WWH4 475 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 COG4Q9H9E3 785 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 ING3Q9NXR8 418 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 FAM50BQ9Y247 325 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 TRAF6Q9Y4K3 522 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SBF2Q86WG5 1849 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 ATG13O75143 517 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 GUCA1CO95843 209 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 GOT2P00505 430 aaKnown RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SERPIND1P05546 499 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 C8AP07357 584 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 CAP1Q01518 475 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 RELAQ04206 551 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SOX4Q06945 474 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 CARD16Q5EG05 197 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 LAYNQ6UX15 382 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SNX20Q7Z614 316 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 CPNE8Q86YQ8 564 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 OR7A2PQ8NGA2 310 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 OR4K2Q8NGD2 314 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 PROX1Q92786 737 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 NSMCE2Q96MF7 247 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 RIPOR3Q96MK2 946 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 EPB41L1Q9H4G0 881 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 IL1RL2Q9HB29 575 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SEMA4BQ9NPR2 832 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 ABCB10Q9NRK6 738 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 PCDHB9Q9Y5E1 797 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 ECM29Q5VYK3 1845 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 GALTP07902 379 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 HNRNPA1P09651 372 aaKnown RBP eCLIP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 IQCF3P0C7M6 154 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 KELP23276 732 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 S100A3P33764 101 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 ATXN1P54253 815 aaKnown RBP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 NADK2Q4G0N4 442 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 DEPDC1Q5TB30 811 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 DNAJB7Q7Z6W7 309 aaPredicted RBP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 COLGALT2Q8IYK4 626 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 CFAP52Q8N1V2 620 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 BEND7Q8N7W2 519 aaPredicted RBP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 PSMA8Q8TAA3 256 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 ENKURQ8TC29 256 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 TXLNGYQ9BZA5 131 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 POLR1BQ9H9Y6 1135 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 CYTH4Q9UIA0 394 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 CHKBQ9Y259 395 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 MFHAS1Q9Y4C4 1052 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 MYO5AQ9Y4I1 1855 aaKnown RBP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 ELFN1P0C7U0 828 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 PIK3R1P27986 724 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 GPX6P59796 221 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 RAB30Q15771 203 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 CCDC85BQ15834 202 aaPredicted RBP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 MOGQ16653 247 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 SPATS1Q496A3 300 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 SYCE2Q6PIF2 218 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 ABRAXAS1Q6UWZ7 409 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 HFE2Q6ZVN8 426 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 PAGE2Q7Z2X7 111 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 SYTL1Q8IYJ3 562 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 PCDH20Q8N6Y1 951 aaKnown RBP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 UBASH3BQ8TF42 649 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 SMG7Q92540 1137 aaKnown RBP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 TRIB3Q96RU7 358 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 OMDQ99983 421 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 TLE6Q9H808 572 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 DUS2Q9NX74 493 aaKnown RBP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 GNG14A0A1W2PPG7 69 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 TMEM221A6NGB7 291 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 RRM2P31350 389 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 CSTF3Q12996 717 aaKnown RBP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 PPP2R2DQ66LE6 453 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 PLEKHM3Q6ZWE6 761 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 STK32CQ86UX6 486 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 DCAF4L2Q8NA75 395 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 NELL1Q92832 810 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 MED8Q96G25 268 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 C6orf62Q9GZU0 229 aaPredicted RBP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 ARMC7Q9H6L4 198 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 BRD9Q9H8M2 597 aa8.63□□□□□ -1.03
PDE6A-204ENST00000613228 CCDC177Q9NQR7 707 aaPredicted RBP8.63□□□□□ -1.03
PDE6A-204ENST00000613228 MTRRQ9UBK8 725 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms