RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 OR4L1Q8NH43 312 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 TRPC4APQ8TEL6 797 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 EXT2Q93063 718 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 HERC2P3Q9BVR0 1158 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 KLHL25Q9H0H3 589 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 TPK1Q9H3S4 243 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 SOX17Q9H6I2 414 aaPredicted RBP16.33■□□□□ 0.21
CNOT3-208ENST00000613073 GIN1Q9NXP7 522 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 CDH7Q9ULB5 785 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 CNOT6Q9ULM6 557 aaKnown RBP16.33■□□□□ 0.21
CNOT3-208ENST00000613073 INSL5Q9Y5Q6 135 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 ANAPC1Q9H1A4 1944 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 AQP9O43315 295 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 ATP5F1P24539 256 aaPredicted RBP16.33■□□□□ 0.2
CNOT3-208ENST00000613073 GRIA3P42263 894 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 KCNC1P48547 511 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 RAB33AQ14088 237 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 NHSL2Q5HYW2 709 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 ALG1LQ6GMV1 187 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 GLT6D1Q7Z4J2 308 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 CBR4Q8N4T8 237 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 EFHBQ8N7U6 833 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 TSPAN17Q96FV3 270 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 CDKN2AIPNLQ96HQ2 116 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 CATSPERZQ9NTU4 200 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 GTSE1Q9NYZ3 720 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 SPG21Q9NZD8 308 aa16.33■□□□□ 0.2
CNOT3-208ENST00000613073 CNOT11Q9UKZ1 510 aaKnown RBP16.33■□□□□ 0.2
CNOT3-208ENST00000613073 UBA6A0AVT1 1052 aaPredicted RBP16.32■□□□□ 0.2
CNOT3-208ENST00000613073 TRIM38O00635 465 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 TEX28O15482 410 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 PRLP01236 227 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 CAPNS1P04632 268 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 PABPC1P11940 636 aaKnown RBP16.32■□□□□ 0.2
CNOT3-208ENST00000613073 EPHB3P54753 998 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 MLLT10P55197 1068 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 PSME3P61289 254 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 MRNIPQ6NTE8 343 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 UTS2BQ765I0 119 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 IGFN1Q86VF2 1251 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 TRMT2BQ96GJ1 504 aaKnown RBP16.32■□□□□ 0.2
CNOT3-208ENST00000613073 UBXN10Q96LJ8 280 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.32■□□□□ 0.2
CNOT3-208ENST00000613073 AURKCQ9UQB9 309 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 RAI2Q9Y5P3 530 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 A8MT66 165 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 CD160O95971 181 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 CLTBP09497 229 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 TSPAN8P19075 237 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 CR2P20023 1033 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 JAK1P23458 1154 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 DNAJB1P25685 340 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 CDKN1CP49918 316 aaPredicted RBP16.32■□□□□ 0.2
CNOT3-208ENST00000613073 KPNA2P52292 529 aaKnown RBP16.32■□□□□ 0.2
CNOT3-208ENST00000613073 CYP4F8P98187 520 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 ACVR1Q04771 509 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 MOGQ16653 247 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 WFDC5Q8TCV5 224 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 ACDQ96AP0 544 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 TDRD1Q9BXT4 1180 aaKnown RBP16.32■□□□□ 0.2
CNOT3-208ENST00000613073 BPIFA1Q9NP55 256 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 VPS28Q9UK41 221 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 ERGIC3Q9Y282 383 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 CPQQ9Y646 472 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 TCEA1P23193 301 aaKnown RBP16.32■□□□□ 0.2
CNOT3-208ENST00000613073 PRKAA2P54646 552 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 PRKCQQ04759 706 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 KCNJ8Q15842 424 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 KCTD8Q6ZWB6 473 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 CHST9Q7L1S5 443 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 OTOP2Q7RTS6 562 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 TMCO5AQ8N6Q1 288 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 TFAP2CQ92754 450 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 YME1L1Q96TA2 773 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 BEGAINQ9BUH8 593 aa16.32■□□□□ 0.2
CNOT3-208ENST00000613073 MRPL17Q9NRX2 175 aaKnown RBP16.32■□□□□ 0.2
CNOT3-208ENST00000613073 FCF1Q9Y324 198 aaKnown RBP16.32■□□□□ 0.2
CNOT3-208ENST00000613073 CHD7Q9P2D1 2997 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 A6NL46 340 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 TRIM25Q14258 630 aaKnown RBP16.31■□□□□ 0.2
CNOT3-208ENST00000613073 ADAMTS19Q8TE59 1207 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 ITPKCQ96DU7 683 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 SLC39A3Q9BRY0 314 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 TNFRSF12AQ9NP84 129 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 GNPTGQ9UJJ9 305 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 CROTQ9UKG9 612 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 POU2F3Q9UKI9 436 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 TMA7Q9Y2S6 64 aaKnown RBP16.31■□□□□ 0.2
CNOT3-208ENST00000613073 COPG1Q9Y678 874 aaKnown RBP16.31■□□□□ 0.2
CNOT3-208ENST00000613073 PRORSD1PA6NEY8 169 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 NOL3O60936 208 aaKnown RBP16.31■□□□□ 0.2
CNOT3-208ENST00000613073 IPO13O94829 963 aaKnown RBP16.31■□□□□ 0.2
CNOT3-208ENST00000613073 MT-CO1P00395 513 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 F11P03951 625 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 GJA1P17302 382 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 PCYT1AP49585 367 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 WDR5P61964 334 aaKnown RBP16.31■□□□□ 0.2
CNOT3-208ENST00000613073 TIAL1Q01085 375 aaKnown RBP eCLIP16.31■□□□□ 0.2
CNOT3-208ENST00000613073 NFATC3Q12968 1075 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 CARTPTQ16568 116 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms