RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 BOLA3Q53S33 107 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 IZUMO3Q5VZ72 239 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 TIGD7Q6NT04 549 aaPredicted RBP16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 KLHL35Q6PF15 583 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 ABRAXAS1Q6UWZ7 409 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 ADGRG6Q86SQ4 1221 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 TTC30BQ8N4P2 665 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 ANKRD20A12PQ8NF67 263 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 ENOX1Q8TC92 643 aaKnown RBP16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 SNRNP40Q96DI7 357 aaKnown RBP16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 MOCOSQ96EN8 888 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 ZSCAN5AQ9BUG6 496 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 RBM22Q9NW64 420 aaKnown RBP eCLIP16.87■□□□□ 0.294e-7■□□□□ 10.6
CSNK1E-215ENST00000612795 ANKUB1A6NFN9 424 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 MFSD11O43934 449 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 JCHAINP01591 159 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 KLK3P07288 261 aaPredicted RBP16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 RARAP10276 462 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 SPTBP11277 2137 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 TCF4P15884 667 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 VCLP18206 1134 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 RRADP55042 308 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 UBXN1Q04323 297 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 GPS2Q13227 327 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 KRT81Q14533 505 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 PLCL1Q15111 1095 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 QPCTQ16769 361 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 DNTTIP2Q5QJE6 756 aaKnown RBP16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 CERS6Q6ZMG9 384 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 KMT5CQ86Y97 462 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 ENDOVQ8N8Q3 282 aaKnown RBP16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 ADAMTS17Q8TE56 1095 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 GLYATL1Q969I3 302 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 MAP3K3Q99759 626 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 NUP62CLQ9H1M0 184 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 CHST8Q9H2A9 424 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 PCDH18Q9HCL0 1135 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 ASF1BQ9NVP2 202 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 DTLQ9NZJ0 730 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 SEMA5BQ9P283 1151 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 MYO1AQ9UBC5 1043 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 AMACRQ9UHK6 382 aa16.86■□□□□ 0.29
CSNK1E-215ENST00000612795 UBA6A0AVT1 1052 aaPredicted RBP16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 TLCD2A6NGC4 264 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 LGALS16A8MUM7 142 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 ANKRD66B4E2M5 251 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 MTX2O75431 263 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 CBX6O95503 412 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 HLA-DQB2P05538 268 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 VAV2P52735 878 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 GSDMDP57764 484 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 TUBB4BP68371 445 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 CDK18Q07002 472 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 RAPSNQ13702 412 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 TUBB2AQ13885 445 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 KYNUQ16719 465 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 CCDC122Q5T0U0 273 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 AGAP9Q5VTM2 703 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 PDPK2PQ6A1A2 396 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 WASH2PQ6VEQ5 465 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 MED25Q71SY5 747 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 TRAM1L1Q8N609 369 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 TMEM102Q8N9M5 508 aaPredicted RBP16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 ARRDC2Q8TBH0 407 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 MAML1Q92585 1016 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 TUBB2BQ9BVA1 445 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 NUP85Q9BW27 656 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 ADGRE3Q9BY15 652 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 ZFYVE1Q9HBF4 777 aa16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 MRPL47Q9HD33 250 aaKnown RBP16.85■□□□□ 0.29
CSNK1E-215ENST00000612795 MDC1Q14676 2089 aaKnown RBP16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 MATN3O15232 486 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 CDK14O94921 469 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 FTLP02792 175 aaPredicted RBP16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 POU3F2P20265 443 aaPredicted RBP16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 FECHP22830 423 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 ITGA1P56199 1179 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 DCDC1P59894 354 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 HSD11B2P80365 405 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 NIPAL4Q0D2K0 466 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 GALNT2Q10471 571 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 GTF2H3Q13889 308 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 GALNT3Q14435 633 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 GPR19Q15760 415 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 TRAPPC5Q8IUR0 188 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 SLC34A3Q8N130 599 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 CISD2Q8N5K1 135 aaKnown RBP16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 GPR26Q8NDV2 337 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 GPR150Q8NGU9 434 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 TEKT4Q8WW24 435 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 CD180Q99467 661 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 SYT11Q9BT88 431 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 RAD18Q9NS91 495 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 KCND1Q9NSA2 647 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 TCFL5Q9UL49 500 aa16.84■□□□□ 0.29
CSNK1E-215ENST00000612795 VEGFDO43915 354 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 RAB40ALP0C0E4 278 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 CD86P42081 329 aa16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 IFI16Q16666 785 aaKnown RBP16.83■□□□□ 0.28
CSNK1E-215ENST00000612795 TMTC4Q5T4D3 741 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms