RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 KMOO15229 486 aa22.98■■□□□ 1.27
MMP28-203ENST00000612672 CA4P22748 312 aa22.98■■□□□ 1.27
MMP28-203ENST00000612672 PGDP52209 483 aa22.98■■□□□ 1.27
MMP28-203ENST00000612672 DCDC1P59894 354 aa22.98■■□□□ 1.27
MMP28-203ENST00000612672 CCDC122Q5T0U0 273 aa22.98■■□□□ 1.27
MMP28-203ENST00000612672 PAPD7Q5XG87 772 aaKnown RBP22.98■■□□□ 1.27
MMP28-203ENST00000612672 HGSNATQ68CP4 663 aa22.98■■□□□ 1.27
MMP28-203ENST00000612672 TRAM1L1Q8N609 369 aa22.98■■□□□ 1.27
MMP28-203ENST00000612672 ZSCAN5AQ9BUG6 496 aa22.98■■□□□ 1.27
MMP28-203ENST00000612672 SLC25A23Q9BV35 468 aa22.98■■□□□ 1.27
MMP28-203ENST00000612672 ZFYVE1Q9HBF4 777 aa22.98■■□□□ 1.27
MMP28-203ENST00000612672 ANO10Q9NW15 660 aa22.98■■□□□ 1.27
MMP28-203ENST00000612672 NFKBIL1Q9UBC1 381 aaPredicted RBP22.98■■□□□ 1.27
MMP28-203ENST00000612672 TCP11X1B4DZS4 312 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 JCHAINP01591 159 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 MT-ND3P03897 115 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 BPIP17213 487 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 PTPN4P29074 926 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 CA5AP35218 305 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 PTGIRP43119 386 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 CCL11P51671 97 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 STX1AQ16623 288 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 EIF2S3LQ2VIR3 472 aaKnown RBP22.97■■□□□ 1.27
MMP28-203ENST00000612672 CCDC183Q5T5S1 534 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 AGAP9Q5VTM2 703 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 LCN10Q6JVE6 187 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 TMC3Q7Z5M5 1100 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 SLC38A9Q8NBW4 561 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 ZDHHC12Q96GR4 267 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 MAP3K3Q99759 626 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 RAB33BQ9H082 229 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 RARRES3Q9UL19 164 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 ZNF711Q9Y462 761 aa22.97■■□□□ 1.27
MMP28-203ENST00000612672 PCDHGA9Q9Y5G4 932 aaKnown RBP22.97■■□□□ 1.27
MMP28-203ENST00000612672 GPR89AB7ZAQ6 455 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 AURKAO14965 403 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 CLDN1O95832 211 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 GPR89BP0CG08 455 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 TAS2R40P59535 323 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 GPS2Q13227 327 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 INPP5JQ15735 1006 aaPredicted RBP22.96■■□□□ 1.27
MMP28-203ENST00000612672 WASH2PQ6VEQ5 465 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 SIDT2Q8NBJ9 832 aaKnown RBP22.96■■□□□ 1.27
MMP28-203ENST00000612672 ADAMTS17Q8TE56 1095 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 FAF2Q96CS3 445 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 HDAC11Q96DB2 347 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 CXorf40BQ96DE9 158 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 ING2Q9H160 280 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 CASS4Q9NQ75 786 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 WASH6PQ9NQA3 447 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 IP6K2Q9UHH9 426 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 SPO11Q9Y5K1 396 aa22.96■■□□□ 1.27
MMP28-203ENST00000612672 FER1L5A0AVI2 2057 aa22.95■■□□□ 1.26
MMP28-203ENST00000612672 FAM83HQ6ZRV2 1179 aaPredicted RBP22.95■■□□□ 1.26
MMP28-203ENST00000612672 TCTN2Q96GX1 697 aa22.95■■□□□ 1.26
MMP28-203ENST00000612672 ZNF670Q9BS34 389 aa22.95■■□□□ 1.26
MMP28-203ENST00000612672 MFRPQ9BY79 579 aa22.95■■□□□ 1.26
MMP28-203ENST00000612672 PDE7BQ9NP56 450 aa22.95■■□□□ 1.26
MMP28-203ENST00000612672 GPR39O43194 453 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 CEACAM4O75871 244 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 CDK14O94921 469 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 CYP1A2P05177 515 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 SSR1P43307 286 aaKnown RBP22.94■■□□□ 1.26
MMP28-203ENST00000612672 ATP13A5Q4VNC0 1218 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 PRAMEF17Q5VTA0 474 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 SASS6Q6UVJ0 657 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 SYVN1Q86TM6 617 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 THAP4Q8WY91 577 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 ZNF514Q96K75 400 aaPredicted RBP22.94■■□□□ 1.26
MMP28-203ENST00000612672 PPM1MQ96MI6 270 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 GPR87Q9BY21 358 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 FGF21Q9NSA1 209 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 CUEDC1Q9NWM3 386 aaPredicted RBP22.94■■□□□ 1.26
MMP28-203ENST00000612672 GTF3C3Q9Y5Q9 886 aa22.94■■□□□ 1.26
MMP28-203ENST00000612672 IDSP22304 550 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 FECHP22830 423 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 IFI35P80217 286 aaPredicted RBP22.93■■□□□ 1.26
MMP28-203ENST00000612672 GPR19Q15760 415 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 PDPK2PQ6A1A2 396 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 JMJD6Q6NYC1 403 aaPredicted RBP22.93■■□□□ 1.26
MMP28-203ENST00000612672 ZNF517Q6ZMY9 492 aaPredicted RBP22.93■■□□□ 1.26
MMP28-203ENST00000612672 RBM12BQ8IXT5 1001 aaKnown RBP22.93■■□□□ 1.26
MMP28-203ENST00000612672 CCNYQ8ND76 341 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 UBXN4Q92575 508 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 TADA1Q96BN2 335 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 NAP1L5Q96NT1 182 aaPredicted RBP22.93■■□□□ 1.26
MMP28-203ENST00000612672 NUDT9Q9BW91 350 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 ADGRE3Q9BY15 652 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 BPIFA1Q9NP55 256 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 ACSS2Q9NR19 701 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 PSMD13Q9UNM6 376 aa22.93■■□□□ 1.26
MMP28-203ENST00000612672 DDX3YO15523 660 aaKnown RBP22.92■■□□□ 1.26
MMP28-203ENST00000612672 VEGFDO43915 354 aa22.92■■□□□ 1.26
MMP28-203ENST00000612672 DCTP40126 519 aa22.92■■□□□ 1.26
MMP28-203ENST00000612672 CTSCP53634 463 aa22.92■■□□□ 1.26
MMP28-203ENST00000612672 NOMO1Q15155 1222 aa22.92■■□□□ 1.26
MMP28-203ENST00000612672 RPE65Q16518 533 aa22.92■■□□□ 1.26
MMP28-203ENST00000612672 PCSK7Q16549 785 aa22.92■■□□□ 1.26
MMP28-203ENST00000612672 FBXO38Q6PIJ6 1188 aa22.92■■□□□ 1.26
MMP28-203ENST00000612672 TRAPPC5Q8IUR0 188 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms