RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 CLCNKAP51800 687 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 CDK18Q07002 472 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 TUBB3Q13509 450 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 DNASE1L3Q13609 305 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 MAP7Q14244 749 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 PLCL1Q15111 1095 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 ASB18Q6ZVZ8 466 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 H2AFVQ71UI9 128 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 ATCAYQ86WG3 371 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 PPP1R3BQ86XI6 285 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 CT55Q8WUE5 264 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 IMP4Q96G21 291 aaKnown RBP13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 MAK16Q9BXY0 300 aaKnown RBP13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 UCK1Q9HA47 277 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 IFNKQ9P0W0 207 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 FAM8A1Q9UBU6 413 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 CAPN11Q9UMQ6 739 aa13.12□□□□□ -0.31
HMGB1P24-201ENST00000611897 ICE1Q9Y2F5 2266 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 SYCE3A1L190 88 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 GOLGA6L19H0YKK7 550 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 GPR39O43194 453 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 SPAG6O75602 509 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 NDST3O95803 873 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 PBX1P40424 430 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 TNNT3P45378 269 aaPredicted RBP13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 ARL4DP49703 201 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 RPS18P62269 152 aaKnown RBP13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 CHAF1BQ13112 559 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 PDK1Q15118 436 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 LLGL1Q15334 1064 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 ATP13A5Q4VNC0 1218 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 PDPK2PQ6A1A2 396 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 PRSS42Q7Z5A4 293 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 TMC3Q7Z5M5 1100 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 ZNF547Q8IVP9 402 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 SIDT2Q8NBJ9 832 aaKnown RBP13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 GPR150Q8NGU9 434 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 ZDHHC12Q96GR4 267 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 RUFY1Q96T51 708 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 MAGEE1Q9HCI5 957 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 SLC40A1Q9NP59 571 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 KCND3Q9UK17 655 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 RARRES3Q9UL19 164 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 WDR37Q9Y2I8 494 aa13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 CFAP20Q9Y6A4 193 aaKnown RBP13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 UTP20O75691 2785 aaKnown RBP13.11□□□□□ -0.31
HMGB1P24-201ENST00000611897 A0A0A6YYK5 440 aaPredicted RBP13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 BLACEA4D250 179 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 OR2AG2A6NM03 316 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 BUD23O43709 281 aaKnown RBP13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 VEGFDO43915 354 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 CREG1O75629 220 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 IL11RAQ14626 422 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 PPP2R5EQ16537 467 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 FAM151BQ6UXP7 276 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 FAM26EQ8N5C1 309 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 SLC25A41Q8N5S1 370 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 SLC25A51Q9H1U9 297 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 ACTL8Q9H568 366 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 GLOD4Q9HC38 313 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 PDE7BQ9NP56 450 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 IMP3Q9NV31 184 aaKnown RBP13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 NFKBIL1Q9UBC1 381 aaPredicted RBP13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 TLK1Q9UKI8 766 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 TMPRSS11EQ9UL52 423 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 PADI1Q9ULC6 663 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 HYOU1Q9Y4L1 999 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 SPTBP11277 2137 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 MED13Q9UHV7 2174 aa13.1□□□□□ -0.31
HMGB1P24-201ENST00000611897 IGHV5-51A0A0C4DH38 117 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 TOX3O15405 576 aaPredicted RBP13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 DDX3YO15523 660 aaKnown RBP13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 AKR1B10O60218 316 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 NTRK1P04629 796 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 EBLN1P0CF75 366 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 FGF5P12034 268 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 GP1BBP13224 206 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 FOLR1P15328 257 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 NELFEP18615 380 aaKnown RBP13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 NFKB1P19838 968 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 AKT1P31749 480 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 CHRNA4P43681 627 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 ARCN1P48444 511 aaKnown RBP13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 PMS2P54278 862 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 TMEM115Q12893 351 aaPredicted RBP13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 SLC18A3Q16572 532 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 CRTC2Q53ET0 693 aaPredicted RBP13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 DNTTIP2Q5QJE6 756 aaKnown RBP13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 CPZQ66K79 652 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 KAZNQ674X7 775 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 SLC9A4Q6AI14 798 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 DUS1LQ6P1R4 473 aaKnown RBP13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 CYB5D1Q6P9G0 228 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 FAM199XQ6PEV8 388 aaPredicted RBP13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 ABRAXAS1Q6UWZ7 409 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 CERS6Q6ZMG9 384 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 DET1Q7L5Y6 550 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 EFCAB3Q8N7B9 438 aa13.09□□□□□ -0.31
HMGB1P24-201ENST00000611897 BLOC1S5Q8TDH9 187 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms