RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CST5P28325 142 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 IL5RAQ01344 420 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 MOGSQ13724 837 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 SPIDRQ14159 915 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 GRM2Q14416 872 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 PITRM1Q5JRX3 1037 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 LRRC66Q68CR7 880 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 TRNP1Q6NT89 227 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 C22orf39Q6P5X5 142 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 Q6ZVL8 140 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 PAQR9Q6ZVX9 377 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ZNF438Q7Z4V0 828 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 DHDDSQ86SQ9 333 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ZDHHC13Q8IUH4 622 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 BEND7Q8N7W2 519 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 UBR7Q8N806 425 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 B4GALNT2Q8NHY0 566 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ACTRT2Q8TDY3 377 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 TMEM174Q8WUU8 243 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 IRF7Q92985 503 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ZFYVE19Q96K21 471 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 MRGPRX2Q96LB1 330 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ZNF317Q96PQ6 595 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 NR1H4Q96RI1 486 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ZNF184Q99676 751 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 UGT2B28Q9BY64 529 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 SOHLH2Q9NX45 425 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 NUDT4Q9NZJ9 180 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 PSME2Q9UL46 239 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ADAM12O43184 909 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 HNRNPRO43390 633 aaKnown RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CLDN9O95484 217 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 IDSP22304 550 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 KELP23276 732 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CSTF3Q12996 717 aaKnown RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 PHKG1Q16816 387 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 GPR33Q49SQ1 333 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 FGD3Q5JSP0 725 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ATAD3BQ5T9A4 648 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 PAOXQ6QHF9 649 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CDHR3Q6ZTQ4 885 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 NET1Q7Z628 596 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CILP2Q8IUL8 1156 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ZC3H7AQ8IWR0 971 aaKnown RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CMTR2Q8IYT2 770 aaKnown RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 DSELQ8IZU8 1212 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 SORCS1Q8WY21 1168 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 STARD8Q92502 1023 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CENPIQ92674 756 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CLIP3Q96DZ5 547 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 TRMT61BQ9BVS5 477 aaKnown RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 RERGLQ9H628 205 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 OXSMQ9NWU1 459 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 GALPQ9UBC7 116 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 THSD7AQ9UPZ6 1657 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 SMCHD1A6NHR9 2005 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 A8MT66 165 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 DYRK3O43781 588 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 FAM189A1O60320 539 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 RASGRP1O95267 797 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ASLP04424 464 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 IL4RP24394 825 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CLK1P49759 484 aaKnown RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 SLC18A2Q05940 514 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 LMAN2Q12907 356 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 SLC9B1Q4ZJI4 515 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ZCCHC8Q6NZY4 707 aaKnown RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 C16orf87Q6PH81 154 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 DPY19L3Q6ZPD9 716 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 TPRG1Q6ZUI0 275 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 RALGPS2Q86X27 583 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 EID3Q8N140 333 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ZNF276Q8N554 614 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CPSF7Q8N684 471 aaKnown RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 CNTD1Q8N815 330 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 PNPT1Q8TCS8 783 aaKnown RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 MAGEE2Q8TD90 523 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 WFIKKN2Q8TEU8 576 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 IMP4Q96G21 291 aaKnown RBP7.2□□□□□ -1.26
CSDE1-218ENST00000610726 DNAJC28Q9NX36 388 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ADPRHL2Q9NX46 363 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 KLHL28Q9NXS3 571 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 TAS2R1Q9NYW7 299 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 B4GALT6Q9UBX8 382 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 PRKAG3Q9UGI9 489 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 LRCH1Q9Y2L9 728 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ACTL7AQ9Y615 435 aa7.2□□□□□ -1.26
CSDE1-218ENST00000610726 ANKRD12Q6UB98 2062 aa7.19□□□□□ -1.26
CSDE1-218ENST00000610726 E7ESA3 106 aa7.19□□□□□ -1.26
CSDE1-218ENST00000610726 RASSF9O75901 435 aa7.19□□□□□ -1.26
CSDE1-218ENST00000610726 CLPTM1O96005 669 aa7.19□□□□□ -1.26
CSDE1-218ENST00000610726 EFNA1P20827 205 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-218ENST00000610726 IGFBP6P24592 240 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-218ENST00000610726 SSR2P43308 183 aa7.19□□□□□ -1.26
CSDE1-218ENST00000610726 RALGPS1Q5JS13 557 aa7.19□□□□□ -1.26
CSDE1-218ENST00000610726 ALKAL1Q6UXT8 129 aa7.19□□□□□ -1.26
CSDE1-218ENST00000610726 RINLQ6ZS11 566 aa7.19□□□□□ -1.26
CSDE1-218ENST00000610726 TMEM26Q6ZUK4 368 aa7.19□□□□□ -1.26
CSDE1-218ENST00000610726 PARGQ86W56 976 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms