RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 PANX3Q96QZ0 392 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 SEMA4BQ9NPR2 832 aaPredicted RBP11.3□□□□□ -0.6
LINC01278-204ENST00000609143 DZANK1Q9NVP4 752 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 PRRC2BQ5JSZ5 2229 aaKnown RBP11.3□□□□□ -0.6
LINC01278-204ENST00000609143 UPK3BL1B0FP48 263 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 UPK3BL2E5RIL1 263 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 GIPC1O14908 333 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 RAD51BO15315 384 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 ITGAXP20702 1163 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 HK3P52790 923 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 SQLEQ14534 574 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 TRMT5Q32P41 509 aaKnown RBP11.3□□□□□ -0.6
LINC01278-204ENST00000609143 UGT3A2Q3SY77 523 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 ATP13A5Q4VNC0 1218 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 EFL1Q7Z2Z2 1120 aaKnown RBP11.3□□□□□ -0.6
LINC01278-204ENST00000609143 STMN2Q93045 179 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 FAM126AQ9BYI3 521 aaPredicted RBP11.3□□□□□ -0.6
LINC01278-204ENST00000609143 DCLRE1BQ9H816 532 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 RAD18Q9NS91 495 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 UTP6Q9NYH9 597 aaKnown RBP11.3□□□□□ -0.6
LINC01278-204ENST00000609143 PCTPQ9UKL6 214 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 DNAJC15Q9Y5T4 150 aa11.3□□□□□ -0.6
LINC01278-204ENST00000609143 LAMA2P24043 3122 aaKnown RBP11.29□□□□□ -0.6
LINC01278-204ENST00000609143 PPP6CO00743 305 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 AGTR2P50052 363 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 ZNF805Q5CZA5 627 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 GPRC6AQ5T6X5 926 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 C12orf40Q86WS4 652 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 DEFB107AQ8IZN7 70 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 OR56A4Q8NGH8 313 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 HCAR2Q8TDS4 363 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 TWIST2Q8WVJ9 160 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 CLPTM1LQ96KA5 538 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 ELOVL2Q9NXB9 296 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 KLHL42Q9P2K6 505 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 DKK3Q9UBP4 350 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 SLC7A8Q9UHI5 535 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 TSR3Q9UJK0 312 aaKnown RBP11.29□□□□□ -0.6
LINC01278-204ENST00000609143 L3MBTL1Q9Y468 752 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 TNPO3Q9Y5L0 923 aaKnown RBP11.29□□□□□ -0.6
LINC01278-204ENST00000609143 A0A088AWK7 358 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 OR56A5P0C7T3 313 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 ARSAP15289 507 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 PBX2P40425 430 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 E2F5Q15329 346 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 MAPRE2Q15555 327 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 RBBP7Q16576 425 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 FBXO48Q5FWF7 155 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 RARS2Q5T160 578 aaKnown RBP11.29□□□□□ -0.6
LINC01278-204ENST00000609143 SBSNQ6UWP8 590 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 C16orf89Q6UX73 402 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 RFLNAQ6ZTI6 216 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 ETFBKMTQ8IXQ9 262 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 ENDOVQ8N8Q3 282 aaKnown RBP11.29□□□□□ -0.6
LINC01278-204ENST00000609143 VN1R2Q8NFZ6 395 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 NAT14Q8WUY8 206 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 WDR60Q8WVS4 1066 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 FGF13Q92913 245 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 CDCA3Q99618 268 aaPredicted RBP11.29□□□□□ -0.6
LINC01278-204ENST00000609143 HGH1Q9BTY7 390 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 SPATA16Q9BXB7 569 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 EBF3Q9H4W6 596 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 PCDH12Q9NPG4 1184 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 LATS2Q9NRM7 1088 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 THG1LQ9NWX6 298 aaKnown RBP11.29□□□□□ -0.6
LINC01278-204ENST00000609143 NDE1Q9NXR1 346 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 KCTD5Q9NXV2 234 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 GDE1Q9NZC3 331 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 NOP53Q9NZM5 478 aaKnown RBP11.29□□□□□ -0.6
LINC01278-204ENST00000609143 DEC1Q9P2X7 70 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 ATG2AQ2TAZ0 1938 aa11.29□□□□□ -0.6
LINC01278-204ENST00000609143 IGLV3-16A0A075B6K0 115 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 AIM2O14862 343 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 ESRRBO95718 433 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 CHEK2O96017 543 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 CTSLP07711 333 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 CBSLP0DN79 551 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 TIMP2P16035 220 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 CBSP35520 551 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 NUDT2P50583 147 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 DCDC1P59894 354 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 CDC16Q13042 620 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 PPP1R3AQ16821 1122 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 KHDC1Q4VXA5 237 aaKnown RBP11.28□□□□□ -0.6
LINC01278-204ENST00000609143 ACSBG2Q5FVE4 666 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 C1orf146Q5VVC0 180 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 LARP4Q71RC2 724 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC01278-204ENST00000609143 GET4Q7L5D6 327 aaPredicted RBP11.28□□□□□ -0.6
LINC01278-204ENST00000609143 DDIASQ8IXT1 998 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 KYQ8NBH2 561 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 GDPD5Q8WTR4 605 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 ZFYVE19Q96K21 471 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 NUSAP1Q9BXS6 441 aaKnown RBP11.28□□□□□ -0.6
LINC01278-204ENST00000609143 FAM83DQ9H4H8 585 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 MTG2Q9H4K7 406 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 PFDN4Q9NQP4 134 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 OBP2AQ9NY56 170 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 EIF2B4Q9UI10 523 aaKnown RBP11.28□□□□□ -0.6
LINC01278-204ENST00000609143 CD84Q9UIB8 345 aa11.28□□□□□ -0.6
LINC01278-204ENST00000609143 OARD1Q9Y530 152 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms