RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 UGT1A3P35503 534 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 TSPAN7P41732 249 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 RAB15P59190 212 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 UBE2IP63279 158 aaKnown RBP13.02□□□□□ -0.33
TOM1-218ENST00000608674 KIF5AQ12840 1032 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 KHDC1Q4VXA5 237 aaKnown RBP13.02□□□□□ -0.33
TOM1-218ENST00000608674 ANKRD20A2Q5SQ80 823 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 DCAF12Q5T6F0 453 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 ANKRD20A1Q5TYW2 823 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 ANKRD20A3Q5VUR7 823 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 TMEM26Q6ZUK4 368 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 PEX26Q7Z412 305 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 VASH2Q86V25 355 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 ZNF547Q8IVP9 402 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 SYCE1Q8N0S2 351 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 LRRC57Q8N9N7 239 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 JPH3Q8WXH2 748 aaPredicted RBP13.02□□□□□ -0.33
TOM1-218ENST00000608674 CXorf40BQ96DE9 158 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 SGF29Q96ES7 293 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 PPP1R2P1Q96PQ5 205 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 FAM118BQ9BPY3 351 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 DDA1Q9BW61 102 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 TBC1D10AQ9BXI6 508 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 UCK1Q9HA47 277 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 UGT1A7Q9HAW7 530 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 UGT1A10Q9HAW8 530 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 UGT1A8Q9HAW9 530 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 OCIAD1Q9NX40 245 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 SCHIP1Q9P0W5 487 aaPredicted RBP13.02□□□□□ -0.33
TOM1-218ENST00000608674 TRIM10Q9UDY6 481 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 TMPRSS11EQ9UL52 423 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 B3GALT1Q9Y5Z6 326 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 TLN1Q9Y490 2541 aaKnown RBP13.01□□□□□ -0.33
TOM1-218ENST00000608674 GRID2IPA4D2P6 1211 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 C5orf60A6NFR6 353 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.01□□□□□ -0.33
TOM1-218ENST00000608674 KCNJ13O60928 360 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 PYGMP11217 842 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 MSH3P20585 1137 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 LPOP22079 712 aaPredicted RBP13.01□□□□□ -0.33
TOM1-218ENST00000608674 PSMB4P28070 264 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 AKT1P31749 480 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 SLC19A1P41440 591 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 HALP42357 657 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 DRG2P55039 364 aaKnown RBP13.01□□□□□ -0.33
TOM1-218ENST00000608674 TAF1AQ15573 450 aaPredicted RBP13.01□□□□□ -0.33
TOM1-218ENST00000608674 AGAP9Q5VTM2 703 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 PCSK4Q6UW60 755 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 WASH2PQ6VEQ5 465 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 ARHGAP22Q7Z5H3 698 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 AMZ2Q86W34 360 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 DTX1Q86Y01 620 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 RBM12BQ8IXT5 1001 aaKnown RBP13.01□□□□□ -0.33
TOM1-218ENST00000608674 IL22RA1Q8N6P7 574 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 TTC9Q92623 222 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 ALG3Q92685 438 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 SPATA13Q96N96 652 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 TEFMQ96QE5 360 aaKnown RBP13.01□□□□□ -0.33
TOM1-218ENST00000608674 APOL2Q9BQE5 337 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 WASH6PQ9NQA3 447 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 POT1Q9NUX5 634 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 ARL5AQ9Y689 179 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 COL6A6A6NMZ7 2263 aa13.01□□□□□ -0.33
TOM1-218ENST00000608674 ZFC3H1O60293 1989 aaKnown RBP13□□□□□ -0.33
TOM1-218ENST00000608674 OR52A4PA6NMU1 304 aa13□□□□□ -0.33
TOM1-218ENST00000608674 GOLGA6L6A8MZA4 724 aa13□□□□□ -0.33
TOM1-218ENST00000608674 MIF4GDA9UHW6 222 aaKnown RBP13□□□□□ -0.33
TOM1-218ENST00000608674 POP7O75817 140 aaKnown RBP13□□□□□ -0.33
TOM1-218ENST00000608674 UBXN7O94888 489 aa13□□□□□ -0.33
TOM1-218ENST00000608674 CRTAMO95727 393 aa13□□□□□ -0.33
TOM1-218ENST00000608674 TYRP1P17643 537 aa13□□□□□ -0.33
TOM1-218ENST00000608674 PDE1BQ01064 536 aa13□□□□□ -0.33
TOM1-218ENST00000608674 SRSF6Q13247 344 aaKnown RBP13□□□□□ -0.33
TOM1-218ENST00000608674 LONRF2Q1L5Z9 754 aa13□□□□□ -0.33
TOM1-218ENST00000608674 GPRC6AQ5T6X5 926 aa13□□□□□ -0.33
TOM1-218ENST00000608674 AADACL2Q6P093 401 aa13□□□□□ -0.33
TOM1-218ENST00000608674 TMEM220Q6QAJ8 160 aa13□□□□□ -0.33
TOM1-218ENST00000608674 ABRAXAS1Q6UWZ7 409 aa13□□□□□ -0.33
TOM1-218ENST00000608674 CEACAM20Q6UY09 585 aa13□□□□□ -0.33
TOM1-218ENST00000608674 RANBP10Q6VN20 620 aa13□□□□□ -0.33
TOM1-218ENST00000608674 GAS2L3Q86XJ1 694 aa13□□□□□ -0.33
TOM1-218ENST00000608674 TTC13Q8NBP0 860 aa13□□□□□ -0.33
TOM1-218ENST00000608674 SPC24Q8NBT2 197 aa13□□□□□ -0.33
TOM1-218ENST00000608674 DDHD1Q8NEL9 900 aa13□□□□□ -0.33
TOM1-218ENST00000608674 OR4K2Q8NGD2 314 aa13□□□□□ -0.33
TOM1-218ENST00000608674 CCDC110Q8TBZ0 833 aa13□□□□□ -0.33
TOM1-218ENST00000608674 ZNF398Q8TD17 642 aa13□□□□□ -0.33
TOM1-218ENST00000608674 ZNF514Q96K75 400 aaPredicted RBP13□□□□□ -0.33
TOM1-218ENST00000608674 TBL1YQ9BQ87 522 aa13□□□□□ -0.33
TOM1-218ENST00000608674 ZPBPQ9BS86 351 aa13□□□□□ -0.33
TOM1-218ENST00000608674 ZNF624Q9P2J8 865 aaPredicted RBP13□□□□□ -0.33
TOM1-218ENST00000608674 IMPACTQ9P2X3 320 aa13□□□□□ -0.33
TOM1-218ENST00000608674 DNMT3AQ9Y6K1 912 aaPredicted RBP13□□□□□ -0.33
TOM1-218ENST00000608674 OR2AG2A6NM03 316 aa12.99□□□□□ -0.33
TOM1-218ENST00000608674 GPR39O43194 453 aa12.99□□□□□ -0.33
TOM1-218ENST00000608674 C1QL1O75973 258 aa12.99□□□□□ -0.33
TOM1-218ENST00000608674 PRAMEF1O95521 474 aa12.99□□□□□ -0.33
TOM1-218ENST00000608674 FTCDO95954 541 aa12.99□□□□□ -0.33
TOM1-218ENST00000608674 BRAFP15056 766 aa12.99□□□□□ -0.33
TOM1-218ENST00000608674 PBLDP30039 288 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms