RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 OR6C4Q8NGE1 309 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 ZDHHC1Q8WTX9 485 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 LINC00615Q96LM1 132 aaPredicted RBP14.05□□□□□ -0.16
CTSA-219ENST00000607841 CARD6Q9BX69 1037 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 KLC4Q9NSK0 619 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 SIRPGQ9P1W8 387 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 APOBEC2Q9Y235 224 aaKnown RBP14.05□□□□□ -0.16
CTSA-219ENST00000607841 KCNK6Q9Y257 313 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 PLEKHM1Q9Y4G2 1056 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 PCYT1BQ9Y5K3 369 aaPredicted RBP14.05□□□□□ -0.16
CTSA-219ENST00000607841 FAM169AQ9Y6X4 670 aa14.05□□□□□ -0.16
CTSA-219ENST00000607841 DNAH14Q0VDD8 3507 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 ZCWPW2A0A1B0GU75 182 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 SPAARA0A1B0GVQ0 90 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 B4DGG1 531 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 TP73O15350 636 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 NDUFS3O75489 264 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 GSTM1P09488 218 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 CDK4P11802 303 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 IDSP22304 550 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 ACP1P24666 158 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 ARCN1P48444 511 aaKnown RBP14.04□□□□□ -0.16
CTSA-219ENST00000607841 PLTPP55058 493 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 B4GALNT1Q00973 533 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 SLC7A5Q01650 507 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 GUCY2DQ02846 1103 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 GSTM4Q03013 218 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 CBLBQ13191 982 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 ILKQ13418 452 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 BIRC2Q13490 618 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 LONRF1Q17RB8 773 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 PLA2G4EQ3MJ16 856 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 MSS51Q4VC12 460 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 PPM1JQ5JR12 505 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 SPANXN3Q5MJ09 141 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 RNF187Q5TA31 235 aaPredicted RBP14.04□□□□□ -0.16
CTSA-219ENST00000607841 NEPROQ6NW34 567 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 AGGF1Q8N302 714 aaeCLIP14.04□□□□□ -0.16
CTSA-219ENST00000607841 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.04□□□□□ -0.16
CTSA-219ENST00000607841 NOA1Q8NC60 698 aaKnown RBP14.04□□□□□ -0.16
CTSA-219ENST00000607841 GPR150Q8NGU9 434 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 CALML6Q8TD86 181 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 NAT6Q93015 286 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 ART4Q93070 314 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 FCRL3Q96P31 734 aaPredicted RBP14.04□□□□□ -0.16
CTSA-219ENST00000607841 TCF12Q99081 682 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 FOXP3Q9BZS1 431 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 OSGEPL1Q9H4B0 414 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 SPATS2LQ9NUQ6 558 aaKnown RBP14.04□□□□□ -0.16
CTSA-219ENST00000607841 GRHL1Q9NZI5 618 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 ZC3H7BQ9UGR2 993 aaKnown RBP14.04□□□□□ -0.16
CTSA-219ENST00000607841 VPS9D1Q9Y2B5 631 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 PCDHGA1Q9Y5H4 931 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 ST14Q9Y5Y6 855 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 TMEM131Q92545 1883 aa14.04□□□□□ -0.16
CTSA-219ENST00000607841 KNL1Q8NG31 2342 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 C17orf113A0A1B0GUU1 675 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 EME2A4GXA9 379 aaPredicted RBP14.03□□□□□ -0.16
CTSA-219ENST00000607841 MGAT4DA6NG13 374 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 OR5K4A6NMS3 321 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 E7ESA3 106 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 GIPC1O14908 333 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 EIF3HO15372 352 aaKnown RBP eCLIP14.03□□□□□ -0.16
CTSA-219ENST00000607841 SNX2O60749 519 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 OR56A5P0C7T3 313 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 OGNP20774 298 aaKnown RBP14.03□□□□□ -0.16
CTSA-219ENST00000607841 ARNTP27540 789 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 ELK3P41970 407 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 PRLHRP49683 370 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 DMPKQ09013 629 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 PDIA2Q13087 525 aaKnown RBP14.03□□□□□ -0.16
CTSA-219ENST00000607841 C14orf28Q4W4Y0 310 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 C11orf96Q7Z7L8 435 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 LRRC6Q86X45 466 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 SLC35F3Q8IY50 421 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 BEND7Q8N7W2 519 aaPredicted RBP14.03□□□□□ -0.16
CTSA-219ENST00000607841 GPR156Q8NFN8 814 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 OR2L2Q8NH16 312 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 SEC14L1Q92503 715 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 PWWP2AQ96N64 755 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 CCM2Q9BSQ5 444 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 TSSK1BQ9BXA7 367 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 FAM129AQ9BZQ8 928 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 PHACTR1Q9C0D0 580 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 L2HGDHQ9H9P8 463 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 FAM114A2Q9NRY5 505 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 C20orf96Q9NUD7 363 aaPredicted RBP14.03□□□□□ -0.16
CTSA-219ENST00000607841 SLC23A2Q9UGH3 650 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 PADI4Q9UM07 663 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 DNAJC16Q9Y2G8 782 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 TEX264Q9Y6I9 313 aa14.03□□□□□ -0.16
CTSA-219ENST00000607841 DMXL1Q9Y485 3027 aa14.02□□□□□ -0.16
CTSA-219ENST00000607841 SCN8AQ9UQD0 1980 aa14.02□□□□□ -0.16
CTSA-219ENST00000607841 PDZK1P1A8MUH7 402 aa14.02□□□□□ -0.17
CTSA-219ENST00000607841 GOLGA8KD6RF30 607 aa14.02□□□□□ -0.17
CTSA-219ENST00000607841 GOLGA8TH3BQL2 631 aa14.02□□□□□ -0.17
CTSA-219ENST00000607841 PRMT5O14744 637 aaPredicted RBP14.02□□□□□ -0.17
CTSA-219ENST00000607841 ZW10O43264 779 aa14.02□□□□□ -0.17
CTSA-219ENST00000607841 NOBOXO60393 691 aa14.02□□□□□ -0.17
CTSA-219ENST00000607841 RFPL3O75679 317 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms