RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 FAM174AQ8TBP5 190 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 SCARF2Q96GP6 870 aaPredicted RBP16.28■□□□□ 0.2
PMF1-206ENST00000606952 GPR21Q99679 349 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 ORAI3Q9BRQ5 295 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 TSSK1BQ9BXA7 367 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 VPS11Q9H270 941 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 PHPT1Q9NRX4 125 aaPredicted RBP16.28■□□□□ 0.2
PMF1-206ENST00000606952 SPATS2LQ9NUQ6 558 aaKnown RBP16.28■□□□□ 0.2
PMF1-206ENST00000606952 GRID1Q9ULK0 1009 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 GPR34Q9UPC5 381 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 BPTFQ12830 3046 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 CACNA1IQ9P0X4 2223 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 PRR23AA6NEV1 266 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 E5RI56 91 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 MAGEC1O60732 1142 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 SPAG7O75391 227 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 MTX2O75431 263 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 TSPAN12O95859 305 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 FTH1P02794 183 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 AKT2P31751 481 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 RPA3P35244 121 aaPredicted RBP16.27■□□□□ 0.2
PMF1-206ENST00000606952 PFN3P60673 137 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 IRF9Q00978 393 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 DLG1Q12959 904 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 PDAP1Q13442 181 aaKnown RBP16.27■□□□□ 0.2
PMF1-206ENST00000606952 INPP5AQ14642 412 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 SLC36A4Q6YBV0 504 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 GCNT7Q6ZNI0 430 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 RAPH1Q70E73 1250 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 ABI3BPQ7Z7G0 1075 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 TBC1D1Q86TI0 1168 aaPredicted RBP16.27■□□□□ 0.2
PMF1-206ENST00000606952 WDR5BQ86VZ2 330 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 PLD6Q8N2A8 252 aaKnown RBP16.27■□□□□ 0.2
PMF1-206ENST00000606952 NKAPQ8N5F7 415 aaKnown RBP16.27■□□□□ 0.2
PMF1-206ENST00000606952 GDAP1Q8TB36 358 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 TCP10LQ8TDR4 215 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 INPP5DQ92835 1189 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 KLK6Q92876 244 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 FUBP1Q96AE4 644 aaKnown RBP16.27■□□□□ 0.2
PMF1-206ENST00000606952 SLC30A3Q99726 388 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 SELENOSQ9BQE4 189 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 DERL2Q9GZP9 239 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 EBF2Q9HAK2 575 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 GPAMQ9HCL2 828 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 GPR27Q9NS67 375 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 IGSF5Q9NSI5 407 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 ATXN10Q9UBB4 475 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 MBD1Q9UIS9 605 aaPredicted RBP16.27■□□□□ 0.2
PMF1-206ENST00000606952 TRMT6Q9UJA5 497 aaKnown RBP16.27■□□□□ 0.2
PMF1-206ENST00000606952 EMCNQ9ULC0 261 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 SLC17A4Q9Y2C5 497 aa16.27■□□□□ 0.2
PMF1-206ENST00000606952 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.27■□□□□ 0.2
PMF1-206ENST00000606952 A0A1W2PPC4 97 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 KLHL33A6NCF5 533 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 METTL12A8MUP2 240 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 PRAMEF26H0Y7S4 382 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 KPNA5O15131 536 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 SLC31A1O15431 190 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 NUAK1O60285 661 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 DNAJC6O75061 913 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 APOA4P06727 396 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 LTA4HP09960 611 aaKnown RBP16.26■□□□□ 0.19
PMF1-206ENST00000606952 CBSLP0DN79 551 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 CHRM3P20309 590 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 SAT1P21673 171 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 MAT2AP31153 395 aaKnown RBP16.26■□□□□ 0.19
PMF1-206ENST00000606952 CBSP35520 551 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 KPNA2P52292 529 aaKnown RBP16.26■□□□□ 0.19
PMF1-206ENST00000606952 CTSCP53634 463 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 YPEL5P62699 121 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 CCDC153Q494R4 210 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 PLEKHS1Q5SXH7 462 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 PAQR3Q6TCH7 311 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 OXR1Q8N573 874 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 KCTD4Q8WVF5 259 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 ANKRD49Q8WVL7 239 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 FOXJ1Q92949 421 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 BIRC7Q96CA5 298 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 SPACA7Q96KW9 195 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 BMFQ96LC9 184 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 APOOQ9BUR5 198 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 LGR4Q9BXB1 951 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 GPR174Q9BXC1 333 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 RMI1Q9H9A7 625 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 SPATA6Q9NWH7 488 aaPredicted RBP16.26■□□□□ 0.19
PMF1-206ENST00000606952 GALPQ9UBC7 116 aa16.26■□□□□ 0.19
PMF1-206ENST00000606952 DNMT3AQ9Y6K1 912 aaPredicted RBP16.26■□□□□ 0.19
PMF1-206ENST00000606952 TNRC6BQ9UPQ9 1833 aaKnown RBP16.25■□□□□ 0.19
PMF1-206ENST00000606952 C17orf113A0A1B0GUU1 675 aa16.25■□□□□ 0.19
PMF1-206ENST00000606952 IQCF5A8MTL0 148 aa16.25■□□□□ 0.19
PMF1-206ENST00000606952 FPGTO14772 594 aa16.25■□□□□ 0.19
PMF1-206ENST00000606952 PLIN3O60664 434 aa16.25■□□□□ 0.19
PMF1-206ENST00000606952 CDK14O94921 469 aa16.25■□□□□ 0.19
PMF1-206ENST00000606952 ASMTLO95671 621 aa16.25■□□□□ 0.19
PMF1-206ENST00000606952 TOP3BO95985 862 aaKnown RBP16.25■□□□□ 0.19
PMF1-206ENST00000606952 PROCP04070 461 aa16.25■□□□□ 0.19
PMF1-206ENST00000606952 ENO3P13929 434 aaPredicted RBP16.25■□□□□ 0.19
PMF1-206ENST00000606952 CD1DP15813 335 aa16.25■□□□□ 0.19
PMF1-206ENST00000606952 ZNF8P17098 575 aaPredicted RBP16.25■□□□□ 0.19
PMF1-206ENST00000606952 AOAHP28039 575 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms