RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 KIAA1161Q6NSJ0 714 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FRMD7Q6ZUT3 714 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TRPM8Q7Z2W7 1104 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MYO1HQ8N1T3 1032 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SYNPOQ8N3V7 929 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 AFAP1L2Q8N4X5 818 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 IL17RCQ8NAC3 791 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SIDT2Q8NBJ9 832 aaKnown RBP12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FUBP1Q96AE4 644 aaKnown RBP12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LINGO1Q96FE5 620 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RIOK2Q9BVS4 552 aaKnown RBP12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 BOCQ9BWV1 1114 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ERVK-6Q9BXR3 956 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ILKAPQ9H0C8 392 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ALG9Q9H6U8 611 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CD248Q9HCU0 757 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 NPHS2Q9NP85 383 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MRGBPQ9NV56 204 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 DNAJC28Q9NX36 388 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TMPRSS11EQ9UL52 423 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RNF112Q9ULX5 631 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SORCS3Q9UPU3 1222 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 STK38LQ9Y2H1 464 aa12.13□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ERICH4A6NGS2 130 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CCT8L1PA6NM43 557 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SOX1O00570 391 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 NEMP1O14524 444 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SLC16A5O15375 505 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GPR39O43194 453 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PLRG1O43660 514 aaKnown RBP12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 VEGFDO43915 354 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RECQL5O94762 991 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SLC25A14O95258 325 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MTHFD2P13995 350 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 HOXB2P14652 356 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 AOAHP28039 575 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 AKT1P31749 480 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TIE1P35590 1138 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GMPRP36959 345 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PRLHRP49683 370 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ARFIP2P53365 341 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ALDH18A1P54886 795 aaKnown RBP12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CDKL1Q00532 357 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PLOD1Q02809 727 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TDGQ13569 410 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PON2Q15165 354 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 OR4D1Q15615 310 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TTC31Q49AM3 519 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GLIPR1L2Q4G1C9 344 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LACTB2Q53H82 288 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LRRC73Q5JTD7 316 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CFAP157Q5JU67 520 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ADAMTSL4Q6UY14 1074 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ZCCHC23Q6ZST2 131 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TRIM67Q6ZTA4 783 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 AADATQ8N5Z0 425 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PDPRQ8NCN5 879 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ST13P5Q8NFI4 369 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 EEF1AKMT1Q8WVE0 214 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CCT6BQ92526 530 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 C1QTNF7Q9BXJ2 289 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 C20orf27Q9GZN8 174 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 KCNK13Q9HB14 408 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PREBQ9HCU5 417 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LIMD1Q9UGP4 676 aa12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 APOBEC2Q9Y235 224 aaKnown RBP12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TNPO3Q9Y5L0 923 aaKnown RBP12.12□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 C17orf113A0A1B0GUU1 675 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 A0A1W2PQF6 199 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FADS2P1A8MWK0 482 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LOC730098B7Z3J9 87 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 BTN3A1O00481 513 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RAD51BO15315 384 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MID1O15344 667 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LZTS3O60299 673 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TM7SF2O76062 418 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SOD1P00441 154 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 EGFP01133 1207 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 DNTTP04053 509 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 C8GP07360 202 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CA5AP35218 305 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RPL14P50914 215 aaKnown RBP12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 METAP1P53582 386 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 NAGLUP54802 743 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PRKCQQ04759 706 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CCINQ13939 588 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TBCCQ15814 346 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 C2orf27AQ580R0 203 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 HABP4Q5JVS0 413 aaKnown RBP12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ZNF678Q5SXM1 525 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 NAPRTQ6XQN6 538 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RFLNAQ6ZTI6 216 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CCDC121Q6ZUS5 278 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CPNE9Q8IYJ1 553 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CLDN19Q8N6F1 224 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PNPLA1Q8N8W4 532 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 UBTD2Q8WUN7 234 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ASZ1Q8WWH4 475 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GLMNQ92990 594 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SCAMP4Q969E2 229 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms