RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 TRIM68Q6AZZ1 485 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 PGAM4Q8N0Y7 254 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 NXPE1Q8N323 547 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 DNAJC5GQ8N7S2 189 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 FAM156AQ8NDB6 213 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 DLG3Q92796 817 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 ZNF707Q96C28 371 aaPredicted RBP14.29□□□□□ -0.12
VRK3-217ENST00000599538 KLHL32Q96NJ5 620 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 HGH1Q9BTY7 390 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 C1QTNF3Q9BXJ4 246 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 BRD9Q9H8M2 597 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 EFCAB1Q9HAE3 211 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 S100A14Q9HCY8 104 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 POLG2Q9UHN1 485 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 CD84Q9UIB8 345 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 PPIL1Q9Y3C6 166 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 TTC34A8MYJ7 566 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 SNX2O60749 519 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 POP4O95707 220 aaKnown RBP14.29□□□□□ -0.12
VRK3-217ENST00000599538 C1SP09871 688 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 GPX3P22352 226 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 DDX6P26196 483 aaKnown RBP eCLIP14.29□□□□□ -0.12
VRK3-217ENST00000599538 VHLP40337 213 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 ATXN3P54252 364 aaPredicted RBP14.29□□□□□ -0.12
VRK3-217ENST00000599538 B4GALNT1Q00973 533 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 MS4A2Q01362 244 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 MESP2Q0VG99 397 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 ART3Q13508 389 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 ZNF423Q2M1K9 1284 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 TCEAL5Q5H9L2 206 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 GRAMD4Q6IC98 578 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 PSRC1Q6PGN9 363 aaPredicted RBP14.29□□□□□ -0.12
VRK3-217ENST00000599538 C16orf89Q6UX73 402 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 BNC2Q6ZN30 1099 aaPredicted RBP14.29□□□□□ -0.12
VRK3-217ENST00000599538 C12orf76Q8N812 135 aaPredicted RBP14.29□□□□□ -0.12
VRK3-217ENST00000599538 ZNF366Q8N895 744 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 ASIC4Q96FT7 647 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 PDLIM5Q96HC4 596 aaKnown RBP14.29□□□□□ -0.12
VRK3-217ENST00000599538 MCCC1Q96RQ3 725 aaPredicted RBP14.29□□□□□ -0.12
VRK3-217ENST00000599538 TUBGCP5Q96RT8 1024 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 CPEB1Q9BZB8 566 aaKnown RBP14.29□□□□□ -0.12
VRK3-217ENST00000599538 B4GALT6Q9UBX8 382 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 GNPTGQ9UJJ9 305 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 TMPRSS11EQ9UL52 423 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 AGAP14A8MT82 685 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 OR4F21O95013 312 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 GUCA1CO95843 209 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 LRP8Q14114 963 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 PHKG1Q16816 387 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 REP15Q6BDI9 236 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 USP45Q70EL2 814 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 ADGRD2Q7Z7M1 963 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 CBARPQ8N350 705 aaPredicted RBP14.28□□□□□ -0.12
VRK3-217ENST00000599538 TUBGCP3Q96CW5 907 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 RSPRY1Q96DX4 576 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 MRGPRX3Q96LB0 322 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 NSUN3Q9H649 340 aaKnown RBP14.28□□□□□ -0.12
VRK3-217ENST00000599538 ELOVL2Q9NXB9 296 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 CACNA2D2Q9NY47 1150 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 PRPF19Q9UMS4 504 aaKnown RBP14.28□□□□□ -0.12
VRK3-217ENST00000599538 PCDHGA7Q9Y5G6 932 aa14.28□□□□□ -0.12
VRK3-217ENST00000599538 NVLO15381 856 aaKnown RBP14.27□□□□□ -0.12
VRK3-217ENST00000599538 ESRRBO95718 433 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 HGFP14210 728 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 TCN1P20061 433 aaPredicted RBP14.27□□□□□ -0.12
VRK3-217ENST00000599538 ERVPABLB-1P60509 514 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 AP2B1P63010 937 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 RBBP7Q16576 425 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 POM121L1PQ3SYA9 428 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 GPRC6AQ5T6X5 926 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 ELMSAN1Q6PJG2 1045 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 TXNDC11Q6PKC3 985 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 LAYNQ6UX15 382 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 OR2T11Q8NH01 316 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 FRS2Q8WU20 508 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 NAF1Q96HR8 494 aaKnown RBP14.27□□□□□ -0.12
VRK3-217ENST00000599538 ERVW-1Q9UQF0 538 aa14.27□□□□□ -0.12
VRK3-217ENST00000599538 EIF4E1BA6NMX2 242 aaKnown RBP14.27□□□□□ -0.13
VRK3-217ENST00000599538 CTSLP07711 333 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 HOXA9P31269 272 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 DIO3P55073 304 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 CREB5Q02930 508 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 LETMD1Q6P1Q0 360 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 GDPD4Q6W3E5 623 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 FRA10AC1Q70Z53 315 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 RETREG3Q86VR2 466 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 C12orf40Q86WS4 652 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 CDYL2Q8N8U2 506 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 DNAJC9Q8WXX5 260 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 LRCH3Q96II8 777 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 HBEGFQ99075 208 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 SLC39A3Q9BRY0 314 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 CEP44Q9C0F1 390 aa14.27□□□□□ -0.13
VRK3-217ENST00000599538 NOL11Q9H8H0 719 aaKnown RBP14.27□□□□□ -0.13
VRK3-217ENST00000599538 E7ENX8 843 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 C5orf67F2Z3F1 127 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 H3BNX3 289 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 TAPBPO15533 448 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 FFAR2O15552 330 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 XYLBO75191 536 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms