RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ERVH48-1M5A8F1 160 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 GAPDHSO14556 408 aaPredicted RBP14.83□□□□□ -0.04
LIG1-215ENST00000597901 KCNJ13O60928 360 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 FTCDO95954 541 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 VIPP01282 170 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 LIPCP11150 499 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 BRAFP15056 766 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 RPL10P27635 214 aaKnown RBP14.83□□□□□ -0.04
LIG1-215ENST00000597901 MAPK9P45984 424 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 EPHA4P54764 986 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 RHDQ02161 417 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 ITGA9Q13797 1035 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 TAF1AQ15573 450 aaPredicted RBP14.83□□□□□ -0.04
LIG1-215ENST00000597901 SNAP47Q5SQN1 464 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 LDLRAP1Q5SW96 308 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 GPRC6AQ5T6X5 926 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 AGAP9Q5VTM2 703 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 TMEM220Q6QAJ8 160 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 PCSK4Q6UW60 755 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 DTX1Q86Y01 620 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 TRAPPC5Q8IUR0 188 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 TTC13Q8NBP0 860 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 OR4K2Q8NGD2 314 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 UCK1Q9HA47 277 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 SLC39A1Q9NY26 324 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 PCDHB11Q9Y5F2 797 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 DNMT3AQ9Y6K1 912 aaPredicted RBP14.83□□□□□ -0.04
LIG1-215ENST00000597901 KIF26BQ2KJY2 2108 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 GOLGA6L9A6NEM1 432 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 PDZK1P1A8MUH7 402 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 B4E171 279 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 GPR39O43194 453 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 ZNF189O75820 626 aaPredicted RBP14.82□□□□□ -0.04
LIG1-215ENST00000597901 PTMAP06454 111 aaKnown RBP14.82□□□□□ -0.04
LIG1-215ENST00000597901 VCLP18206 1134 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 CD82P27701 267 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 TSPAN7P41732 249 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 ARSDP51689 593 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 CTSCP53634 463 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 DRG2P55039 364 aaKnown RBP14.82□□□□□ -0.04
LIG1-215ENST00000597901 SPARCL1Q14515 664 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 CLCA4Q14CN2 919 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 SEPT7Q16181 437 aaKnown RBP14.82□□□□□ -0.04
LIG1-215ENST00000597901 PARP6Q2NL67 630 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 DENND5AQ6IQ26 1287 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 TMEM26Q6ZUK4 368 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 AMZ2Q86W34 360 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 RNF10Q8N5U6 811 aaKnown RBP14.82□□□□□ -0.04
LIG1-215ENST00000597901 FAM71DQ8N9W8 422 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 DDHD1Q8NEL9 900 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 ART4Q93070 314 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 HES6Q96HZ4 224 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 PPP1R2P1Q96PQ5 205 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 ZMYND15Q9H091 742 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 EPB41L1Q9H4G0 881 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 ARNT2Q9HBZ2 717 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 SLC30A1Q9Y6M5 507 aa14.82□□□□□ -0.04
LIG1-215ENST00000597901 TCRBV7S2A1N4TA0A589 114 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 LILRA5A6NI73 299 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 EFCAB7A8K855 629 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.81□□□□□ -0.04
LIG1-215ENST00000597901 PRB1P04280 392 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 SRSF6Q13247 344 aaKnown RBP14.81□□□□□ -0.04
LIG1-215ENST00000597901 KLF1Q13351 362 aaPredicted RBP14.81□□□□□ -0.04
LIG1-215ENST00000597901 PLXDC1Q8IUK5 500 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 TRIM48Q8IWZ4 208 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 KLHDC8BQ8IXV7 354 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 BMPERQ8N8U9 685 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 CCDC112Q8NEF3 446 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 PMEPA1Q969W9 287 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 WBP1Q96G27 269 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 TBL1YQ9BQ87 522 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 ASPSCR1Q9BZE9 553 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 ZCCHC2Q9C0B9 1178 aaKnown RBP14.81□□□□□ -0.04
LIG1-215ENST00000597901 ASB8Q9H765 288 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 SLC40A1Q9NP59 571 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 OGFRQ9NZT2 677 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 WDR37Q9Y2I8 494 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 R3HDM2Q9Y2K5 976 aaKnown RBP14.81□□□□□ -0.04
LIG1-215ENST00000597901 B3GALT1Q9Y5Z6 326 aa14.81□□□□□ -0.04
LIG1-215ENST00000597901 PTPRQQ9UMZ3 2332 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 OR2AG2A6NM03 316 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 OR52A4PA6NMU1 304 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 SRP72O76094 671 aaKnown RBP14.8□□□□□ -0.04
LIG1-215ENST00000597901 UBXN7O94888 489 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 METTL18O95568 372 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 CRTAMO95727 393 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 TYRP1P17643 537 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 AMD1P17707 334 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 MSH3P20585 1137 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 XIAPP98170 497 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 MC2RQ01718 297 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 DMPKQ09013 629 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 MANEAQ5SRI9 462 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 DCAF12Q5T6F0 453 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 KIAA1614Q5VZ46 1190 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 KCTD11Q693B1 232 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 ARHGEF18Q6ZSZ5 1173 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 FAM129CQ86XR2 697 aa14.8□□□□□ -0.04
LIG1-215ENST00000597901 OR13C4Q8NGS5 318 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms