RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 IL1RAPL1Q9NZN1 696 aa11.95□□□□□ -0.5
SHKBP1-213ENST00000597325 NFKBIL1Q9UBC1 381 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-213ENST00000597325 CD84Q9UIB8 345 aa11.95□□□□□ -0.5
SHKBP1-213ENST00000597325 RABGEF1Q9UJ41 708 aa11.95□□□□□ -0.5
SHKBP1-213ENST00000597325 CRLS1Q9UJA2 301 aa11.95□□□□□ -0.5
SHKBP1-213ENST00000597325 COQ6Q9Y2Z9 468 aa11.95□□□□□ -0.5
SHKBP1-213ENST00000597325 ITPR3Q14573 2671 aa11.95□□□□□ -0.5
SHKBP1-213ENST00000597325 CELSR2Q9HCU4 2923 aa11.95□□□□□ -0.5
SHKBP1-213ENST00000597325 TMEM131Q92545 1883 aa11.95□□□□□ -0.5
SHKBP1-213ENST00000597325 TLN1Q9Y490 2541 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-213ENST00000597325 C2CD3Q4AC94 2353 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 OR51F1A6NGY5 319 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 FAM159BA6NKW6 160 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 GOLGA8KD6RF30 607 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 GOLGA8TH3BQL2 631 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 CD3EAPO15446 510 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 NDUFS2O75306 463 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 PYGLP06737 847 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 ARNTP27540 789 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 ACSL1P33121 698 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 PPARGP37231 505 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 GRK6P43250 576 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 ARCN1P48444 511 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 UCNP55089 124 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 SUZ12Q15022 739 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 EFTUD2Q15029 972 aaKnown RBP eCLIP11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 CHRNA6Q15825 494 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 SEL1L3Q68CR1 1132 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 MARK2Q7KZI7 788 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 TAOK1Q7L7X3 1001 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 TAS2R42Q7RTR8 314 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 SDCCAG8Q86SQ7 713 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 SLC26A11Q86WA9 606 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 TRIM69Q86WT6 500 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 LRRC6Q86X45 466 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 PPM1NQ8N819 430 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 C1orf216Q8TAB5 229 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 ULK4Q96C45 1275 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 TOE1Q96GM8 510 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 IL26Q9NPH9 171 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 VPS9D1Q9Y2B5 631 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 PCDHGA1Q9Y5H4 931 aa11.94□□□□□ -0.5
SHKBP1-213ENST00000597325 PLXNA2O75051 1894 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 GOLGA6L10A6NI86 522 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 SMIM23A6NLE4 172 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 POC1B-GALNT4F8VUJ3 575 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 SHBGP04278 402 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 INHBAP08476 426 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 OGNP20774 298 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 MAT2AP31153 395 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 FOXN2P32314 431 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 SLC1A2P43004 574 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 MSH2P43246 934 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 TTPAP49638 278 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 PPP2CBP62714 309 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 PPP2CAP67775 309 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 NFATC2Q13469 925 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 PEX6Q13608 980 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 UBAP2LQ14157 1087 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 GPR33Q49SQ1 333 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 TMEM259Q4ZIN3 620 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 HENMT1Q5T8I9 393 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 RNF187Q5TA31 235 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 LYPLAL1Q5VWZ2 237 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 RAET1GQ6H3X3 334 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 LRIG3Q6UXM1 1119 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 CERS6Q6ZMG9 384 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 RFLNAQ6ZTI6 216 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 KIAA0408Q6ZU52 694 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 SNX20Q7Z614 316 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 TECPR1Q7Z6L1 1165 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 CROCCP2Q86T23 111 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 CNTN4Q8IWV2 1026 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 TRAM1L1Q8N609 369 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 ZNF248Q8NDW4 579 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 OR2W6PQ8NHA6 318 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 SCG3Q8WXD2 468 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 MRRFQ96E11 262 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 SGSM3Q96HU1 749 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 ZIM3Q96PE6 472 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 PAFAH2Q99487 392 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 CPNE1Q99829 537 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 RIOK2Q9BVS4 552 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 ABCG8Q9H221 673 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 ASB8Q9H765 288 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 VIPAS39Q9H9C1 493 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 WSB2Q9NYS7 404 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 VPS18Q9P253 973 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 FETUBQ9UGM5 382 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 ZFR2Q9UPR6 939 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 SSUH2Q9Y2M2 353 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 CENPEQ02224 2701 aa11.93□□□□□ -0.5
SHKBP1-213ENST00000597325 RASGRF2O14827 1237 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 BCAT2O15382 392 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 PCDHGA12O60330 932 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 FSBPO95073 299 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 PCCBP05166 539 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 GM2AP17900 193 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 GPR1P46091 355 aa11.92□□□□□ -0.5
SHKBP1-213ENST00000597325 CCR5P51681 352 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms