RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 FUT11Q495W5 492 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 TIGD2Q4W5G0 525 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 PYCR3Q53H96 274 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 GPRIN3Q6ZVF9 776 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 CPNE9Q8IYJ1 553 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 OR2T11Q8NH01 316 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 ITFG1Q8TB96 612 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 PROKR1Q8TCW9 393 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 BLOC1S5Q8TDH9 187 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 LPPQ93052 612 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 SLC10A4Q96EP9 437 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 SUSD3Q96L08 255 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 HGH1Q9BTY7 390 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 TRIM8Q9BZR9 551 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 RAD21L1Q9H4I0 556 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 DNAJB9Q9UBS3 223 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 MED16Q9Y2X0 877 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 NAALAD2Q9Y3Q0 740 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 TIMM22Q9Y584 194 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 ARL5AQ9Y689 179 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 K7EPI3 171 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 SYNCRIPO60506 623 aaKnown RBP13.1□□□□□ -0.31
VRK3-209ENST00000594948 PRAMEF11O60813 436 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 B3GAT3O94766 335 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 FUCA1P04066 466 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 TFPTP0C1Z6 253 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 ZNF865P0CJ78 1059 aaPredicted RBP13.1□□□□□ -0.31
VRK3-209ENST00000594948 BRCC3P46736 316 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 ZNF140P52738 457 aaPredicted RBP13.1□□□□□ -0.31
VRK3-209ENST00000594948 ECT2LQ008S8 904 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 YWHAHQ04917 246 aaPredicted RBP13.1□□□□□ -0.31
VRK3-209ENST00000594948 TSNQ15631 228 aaKnown RBP13.1□□□□□ -0.31
VRK3-209ENST00000594948 ATP6AP1LQ52LC2 224 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 ALFQ53S48 1182 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 SPARTQ8N0X7 666 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 SLC15A4Q8N697 577 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 MINDY2Q8NBR6 621 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 OR13C4Q8NGS5 318 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 SLC22A17Q8WUG5 538 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 SDCCAG3Q96C92 435 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 BTN2A3PQ96KV6 586 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 ZNF347Q96SE7 839 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 BEGAINQ9BUH8 593 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 LHPPQ9H008 270 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 SOX17Q9H6I2 414 aaPredicted RBP13.1□□□□□ -0.31
VRK3-209ENST00000594948 SMPD4Q9NXE4 827 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 ZNF225Q9UK10 706 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 ITGB1BP2Q9UKP3 347 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 ST14Q9Y5Y6 855 aa13.1□□□□□ -0.31
VRK3-209ENST00000594948 KPNA4O00629 521 aaPredicted RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 TBC1D4O60343 1298 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 RAMP2O60895 175 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 GMNNO75496 209 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 CNTN5O94779 1100 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 ITIH1P19827 911 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 CES1P23141 567 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 MTA1Q13330 715 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 TUSC3Q13454 348 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 IL18R1Q13478 541 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 ZNF846Q147U1 533 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 POLD3Q15054 466 aaPredicted RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 RBBP7Q16576 425 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 FAM110CQ1W6H9 321 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 SMU1Q2TAY7 513 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 C6orf141Q5SZD1 244 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 OTUD3Q5T2D3 398 aaPredicted RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 TMEM214Q6NUQ4 689 aaKnown RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 SLC2A7Q6PXP3 512 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 USP50Q70EL3 339 aaPredicted RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 ITIH5Q86UX2 942 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 ZDHHC13Q8IUH4 622 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 HOMEZQ8IX15 550 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 CLEC4FQ8N1N0 589 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 DTWD1Q8N5C7 304 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 ZNF555Q8NEP9 628 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 MUL1Q969V5 352 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 FKBP10Q96AY3 582 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 MS4A4AQ96JQ5 239 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 TRIB3Q96RU7 358 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 CGREF1Q99674 301 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 OSBPL10Q9BXB5 764 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 AP5M1Q9H0R1 490 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 FAM118AQ9NWS6 357 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 SLAMF8Q9P0V8 285 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 IKZF3Q9UKT9 509 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 PCDHGA4Q9Y5G9 962 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 COMMD10Q9Y6G5 202 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 CDC7O00311 574 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 E2F3O00716 465 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 PFDN6O15212 129 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 MGEA5O60502 916 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 KPNA6O60684 536 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 VPS26AO75436 327 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 NDUFS3O75489 264 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 RPLP2P05387 115 aaKnown RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 SERPINF2P08697 491 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 CDH3P22223 829 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms