RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 MRM3Q9HC36 420 aaKnown RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 SCUBE2Q9NQ36 999 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 TREX1Q9NSU2 369 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 DUS2Q9NX74 493 aaKnown RBP15.25■□□□□ 0.03
PNKP-204ENST00000594661 STOML2Q9UJZ1 356 aa15.25■□□□□ 0.03
PNKP-204ENST00000594661 CHD7Q9P2D1 2997 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 A8MU76 341 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 NOL3O60936 208 aaKnown RBP15.24■□□□□ 0.03
PNKP-204ENST00000594661 CRYZL1O95825 349 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 C8AP07357 584 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 ATXN1LP0C7T5 689 aaKnown RBP15.24■□□□□ 0.03
PNKP-204ENST00000594661 HDCP19113 662 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 ARRB2P32121 409 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 SERPINH1P50454 418 aaKnown RBP15.24■□□□□ 0.03
PNKP-204ENST00000594661 ERVFC1P60507 584 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 MPP1Q00013 466 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 UGP2Q16851 508 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 SIRPB2Q5JXA9 342 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 CCDC81Q6ZN84 652 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 DCP2Q8IU60 420 aaKnown RBP15.24■□□□□ 0.03
PNKP-204ENST00000594661 HERC6Q8IVU3 1022 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 CNTN4Q8IWV2 1026 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 TTC16Q8NEE8 873 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 CAPSLQ8WWF8 208 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 TFAP2CQ92754 450 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 SORT1Q99523 831 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 TCF25Q9BQ70 676 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 PNPOQ9NVS9 261 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 PRKAG2Q9UGJ0 569 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 PACSIN3Q9UKS6 424 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 LAMA3Q16787 3333 aa15.24■□□□□ 0.03
PNKP-204ENST00000594661 HIDE1A8MVS5 230 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 CLDN25C9JDP6 229 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 G3V2L1 256 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 ACOT8O14734 319 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 PHGDHO43175 533 aaKnown RBP15.23■□□□□ 0.03
PNKP-204ENST00000594661 AKAP10O43572 662 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 KDELR3O43731 214 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 LRG1P02750 347 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 PAMP19021 973 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 NR4A1P22736 598 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 MYF6P23409 242 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 AVPR1AP37288 418 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 PGGT1BP53609 377 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 MLLT10P55197 1068 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 PTK2BQ14289 1009 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 ATG14Q6ZNE5 492 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 SLC41A1Q8IVJ1 513 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 TXNDC15Q96J42 360 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 TSNARE1Q96NA8 513 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 CENPOQ9BU64 300 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 TASP1Q9H6P5 420 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 UBA2Q9UBT2 640 aaPredicted RBP15.23■□□□□ 0.03
PNKP-204ENST00000594661 ANKRD6Q9Y2G4 727 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 LOC285095A0A1B0GVY8 99 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 A6NL46 340 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 TBL1XO60907 577 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 ADH1AP07327 375 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 GJA1P17302 382 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 PRKACBP22694 351 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 RGRP47804 291 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 CEACAM7Q14002 265 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 INAVAQ3KP66 663 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 RNF219Q5W0B1 726 aaPredicted RBP15.23■□□□□ 0.03
PNKP-204ENST00000594661 ALG1LQ6GMV1 187 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 TTC33Q6PID6 262 aaPredicted RBP15.23■□□□□ 0.03
PNKP-204ENST00000594661 Q6ZNB5 142 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 KYQ8NBH2 561 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 KREMEN2Q8NCW0 462 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 ANGPTL6Q8NI99 470 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 CDRT15Q96T59 188 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 MGME1Q9BQP7 344 aa15.23■□□□□ 0.03
PNKP-204ENST00000594661 ACE2Q9BYF1 805 aaPredicted RBP15.23■□□□□ 0.03
PNKP-204ENST00000594661 DENND4CQ5VZ89 1909 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 HEATR9A2RTY3 570 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 FAM172BPA6NC97 362 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 CBX4O00257 560 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 DCXO43602 365 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 ZBTB14O43829 449 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 IDH3BO43837 385 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 NCF2P19878 526 aaPredicted RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 ME2P23368 584 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 DNAJB1P25685 340 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 MAP4P27816 1152 aaKnown RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 GRIA3P42263 894 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 SLC1A2P43004 574 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 CCDC58Q4VC31 144 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 PLPP4Q5VZY2 271 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 ZNF470Q6ECI4 717 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 KIAA0930Q6ICG6 404 aaPredicted RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 SPRED2Q7Z698 418 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 DSELQ8IZU8 1212 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 ZNF786Q8N393 782 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 Q8N9G6 341 aaPredicted RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 SLC22A17Q8WUG5 538 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 SH3YL1Q96HL8 342 aaPredicted RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 EXOC2Q96KP1 924 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 UHRF1Q96T88 793 aaPredicted RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 RAD9AQ99638 391 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms