RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ZCCHC23Q6ZST2 131 aa20.52■□□□□ 0.88
PNKP-203ENST00000593946 RHEBL1Q8TAI7 183 aa20.52■□□□□ 0.88
PNKP-203ENST00000593946 LINGO1Q96FE5 620 aa20.52■□□□□ 0.88
PNKP-203ENST00000593946 PDLIM5Q96HC4 596 aaKnown RBP20.52■□□□□ 0.88
PNKP-203ENST00000593946 TFB2MQ9H5Q4 396 aaKnown RBP20.52■□□□□ 0.88
PNKP-203ENST00000593946 KLHL42Q9P2K6 505 aa20.52■□□□□ 0.88
PNKP-203ENST00000593946 CHURC1-FNTBB4DL54 471 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 INPP4BO15327 924 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 DLX3O60479 287 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 MAGEC1O60732 1142 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 SNNO75324 88 aaPredicted RBP20.51■□□□□ 0.87
PNKP-203ENST00000593946 SERPINE1P05121 402 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 ACADMP11310 421 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 GABRG2P18507 467 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 KCNC1P48547 511 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 STARD6P59095 220 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 RPS21P63220 83 aaKnown RBP20.51■□□□□ 0.87
PNKP-203ENST00000593946 TMEM259Q4ZIN3 620 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 ZNF648Q5T619 568 aaPredicted RBP20.51■□□□□ 0.87
PNKP-203ENST00000593946 DET1Q7L5Y6 550 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 ZBTB2Q8N680 514 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 KIAA1191Q96A73 305 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 SGF29Q96ES7 293 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 TSSK1BQ9BXA7 367 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 PREBQ9HCU5 417 aa20.51■□□□□ 0.87
PNKP-203ENST00000593946 MRPS17Q9Y2R5 130 aaKnown RBP20.51■□□□□ 0.87
PNKP-203ENST00000593946 TRIM13O60858 407 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 GRK2P25098 689 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 SFSWAPQ12872 951 aaKnown RBP20.5■□□□□ 0.87
PNKP-203ENST00000593946 STX3Q13277 289 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 LRRC32Q14392 662 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 OR4D1Q15615 310 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 LIPMQ5VYY2 423 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 CGB2Q6NT52 195 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 KIAA1324Q6UXG2 1013 aaKnown RBP20.5■□□□□ 0.87
PNKP-203ENST00000593946 OTOAQ7RTW8 1153 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 PLA2G15Q8NCC3 412 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 PPP1R14CQ8TAE6 165 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 SREK1Q8WXA9 508 aaKnown RBP20.5■□□□□ 0.87
PNKP-203ENST00000593946 C1QTNF2Q9BXJ5 285 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 LTB4R2Q9NPC1 389 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 THEGQ9P2T0 379 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 IKZF3Q9UKT9 509 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 NCKAP1Q9Y2A7 1128 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 CCDC189A1A4V9 331 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 QSOX1O00391 747 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 ATP5F1P24539 256 aaPredicted RBP20.5■□□□□ 0.87
PNKP-203ENST00000593946 PRKAA2P54646 552 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 OCRLQ01968 901 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 TMEM115Q12893 351 aaPredicted RBP20.5■□□□□ 0.87
PNKP-203ENST00000593946 FZD5Q13467 585 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 FGL2Q14314 439 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 WSCD2Q2TBF2 565 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 PNCKQ6P2M8 343 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 ADAMTSL4Q6UY14 1074 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 SYT13Q7L8C5 426 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 PIGWQ7Z7B1 504 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 RASGEF1AQ8N9B8 481 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 SHDQ96IW2 340 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 ATOH8Q96SQ7 321 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 LMAN1LQ9HAT1 526 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 FBXL21Q9UKT6 434 aa20.5■□□□□ 0.87
PNKP-203ENST00000593946 KERAO60938 352 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 H2AFYO75367 372 aaKnown RBP20.49■□□□□ 0.87
PNKP-203ENST00000593946 DGKAP23743 735 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 AOAHP28039 575 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 CCR7P32248 378 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 RGS4P49798 205 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 DGKEP52429 567 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 MAP7D1Q3KQU3 841 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 TTLL9Q3SXZ7 439 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 NEK5Q6P3R8 708 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 GRAMD1AQ96CP6 724 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 COX14Q96I36 57 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 C7orf26Q96N11 449 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 ZCCHC2Q9C0B9 1178 aaKnown RBP20.49■□□□□ 0.87
PNKP-203ENST00000593946 C20orf27Q9GZN8 174 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 KDM4CQ9H3R0 1056 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 POLMQ9NP87 494 aaPredicted RBP20.49■□□□□ 0.87
PNKP-203ENST00000593946 CD93Q9NPY3 652 aa20.49■□□□□ 0.87
PNKP-203ENST00000593946 A0A1W2PQU0 124 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 KANSL1LA0AUZ9 987 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 NEMP2A6NFY4 417 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 F8W8V4 182 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 CDC7O00311 574 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 BTN3A1O00481 513 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 RNGTTO60942 597 aaKnown RBP20.48■□□□□ 0.87
PNKP-203ENST00000593946 PRLHRP49683 370 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 TPMTP51580 245 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 GBX1Q14549 363 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 TSNQ15631 228 aaKnown RBP20.48■□□□□ 0.87
PNKP-203ENST00000593946 NAPRTQ6XQN6 538 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 TRIM74Q86UV6 250 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 HORMAD1Q86X24 394 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 FLCNQ8NFG4 579 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 STAG3L4Q8TBR4 150 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 CCDC126Q96EE4 140 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 ELAC2Q9BQ52 826 aaKnown RBP20.48■□□□□ 0.87
PNKP-203ENST00000593946 GATA5Q9BWX5 397 aaPredicted RBP20.48■□□□□ 0.87
PNKP-203ENST00000593946 OSBPL6Q9BZF3 934 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms