RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PLD6Q8N2A8 252 aaKnown RBP13.32□□□□□ -0.28
VMP1-217ENST00000593168 HEXDCQ8WVB3 486 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 DYDC1Q8WWB3 177 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 KCNJ9Q92806 393 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 AP2M1Q96CW1 435 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 ERLEC1Q96DZ1 483 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 SIPA1Q96FS4 1042 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 LOXL4Q96JB6 756 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 UBXN10Q96LJ8 280 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 MAGEB18Q96M61 343 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 COPS8Q99627 209 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 RIOK2Q9BVS4 552 aaKnown RBP13.32□□□□□ -0.28
VMP1-217ENST00000593168 CLPBQ9H078 707 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 SYTL2Q9HCH5 934 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 MLXIPLQ9NP71 852 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 FBXL12Q9NXK8 326 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 TAS2R13Q9NYV9 303 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 TMEM216Q9P0N5 145 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 TMPRSS11EQ9UL52 423 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 MED16Q9Y2X0 877 aa13.32□□□□□ -0.28
VMP1-217ENST00000593168 PLXNA2O75051 1894 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 ASPMQ8IZT6 3477 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 PLIN3O60664 434 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 VPS26AO75436 327 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 RNASEH2AO75792 299 aaKnown RBP13.31□□□□□ -0.28
VMP1-217ENST00000593168 APOA4P06727 396 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 SERPINB4P48594 390 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 KPNA2P52292 529 aaKnown RBP13.31□□□□□ -0.28
VMP1-217ENST00000593168 IRF9Q00978 393 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 GABPB1Q06547 395 aaPredicted RBP13.31□□□□□ -0.28
VMP1-217ENST00000593168 AGERQ15109 404 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 GPRC6AQ5T6X5 926 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 TTC19Q6DKK2 380 aaPredicted RBP13.31□□□□□ -0.28
VMP1-217ENST00000593168 UGT3A1Q6NUS8 523 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 TMEM92Q6UXU6 159 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 MACC1Q6ZN28 852 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 TBC1D1Q86TI0 1168 aaPredicted RBP13.31□□□□□ -0.28
VMP1-217ENST00000593168 CENPLQ8N0S6 344 aaPredicted RBP13.31□□□□□ -0.28
VMP1-217ENST00000593168 BTN2A2Q8WVV5 523 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 NUS1Q96E22 293 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 MRGPRX1Q96LB2 322 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 PAIP2Q9BPZ3 127 aaKnown RBP13.31□□□□□ -0.28
VMP1-217ENST00000593168 C12orf65Q9H3J6 166 aaKnown RBP13.31□□□□□ -0.28
VMP1-217ENST00000593168 SERGEFQ9UGK8 458 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 GNPTGQ9UJJ9 305 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 EMCNQ9ULC0 261 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 FZD4Q9ULV1 537 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 RUVBL2Q9Y230 463 aaKnown RBP13.31□□□□□ -0.28
VMP1-217ENST00000593168 NCKAP1Q9Y2A7 1128 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 OAS3Q9Y6K5 1087 aaKnown RBP13.31□□□□□ -0.28
VMP1-217ENST00000593168 CEP295Q9C0D2 2601 aa13.31□□□□□ -0.28
VMP1-217ENST00000593168 FADS2P1A8MWK0 482 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 CFAP99D6REC4 459 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 BIRC5O15392 142 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 PLRG1O43660 514 aaKnown RBP13.3□□□□□ -0.28
VMP1-217ENST00000593168 ATG13O75143 517 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 TM7SF2O76062 418 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 PCDH8O95206 1070 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 TOP3BO95985 862 aaKnown RBP13.3□□□□□ -0.28
VMP1-217ENST00000593168 PROCP04070 461 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 PROS1P07225 676 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 LTA4HP09960 611 aaKnown RBP13.3□□□□□ -0.28
VMP1-217ENST00000593168 PGGT1BP53609 377 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 PDAP1Q13442 181 aaKnown RBP13.3□□□□□ -0.28
VMP1-217ENST00000593168 ZNF460Q14592 562 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 FAM83EQ2M2I3 478 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 SETMARQ53H47 684 aaPredicted RBP13.3□□□□□ -0.28
VMP1-217ENST00000593168 LDLRAP1Q5SW96 308 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 AGAP9Q5VTM2 703 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 PTRHD1Q6GMV3 140 aaKnown RBP13.3□□□□□ -0.28
VMP1-217ENST00000593168 TCEAL6Q6IPX3 200 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 C16orf46Q6P387 395 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 NEK5Q6P3R8 708 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 TMEM207Q6UWW9 146 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 RGS9BPQ6ZS82 235 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 SYT13Q7L8C5 426 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 TAX1BP1Q86VP1 789 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 CACUL1Q86Y37 369 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 DDHD1Q8NEL9 900 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 ARMC2Q8NEN0 867 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 GDAP1Q8TB36 358 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 GANCQ8TET4 914 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 KCTD4Q8WVF5 259 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 TCEAL3Q969E4 200 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 GPR78Q96P69 363 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 GPR21Q99679 349 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 BOCQ9BWV1 1114 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 KDM4CQ9H3R0 1056 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 NMRAL1Q9HBL8 299 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 POLMQ9NP87 494 aaPredicted RBP13.3□□□□□ -0.28
VMP1-217ENST00000593168 LATS2Q9NRM7 1088 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 IGSF5Q9NSI5 407 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 ZNF358Q9NW07 568 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 KLHL42Q9P2K6 505 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 MID2Q9UJV3 735 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 LRRK1Q38SD2 2015 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 CACNA1GO43497 2377 aa13.3□□□□□ -0.28
VMP1-217ENST00000593168 PLXNB3Q9ULL4 1909 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 CCDC163A0A0D9SF12 145 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 F8W8V4 182 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms