RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 A8MU76 341 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 KMOO15229 486 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 TOX3O15405 576 aaPredicted RBP10.25□□□□□ -0.77
VPS4B-207ENST00000591519 VEGFDO43915 354 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 SNX2O60749 519 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 NDUFA10O95299 355 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 IPO7O95373 1038 aaKnown RBP10.25□□□□□ -0.77
VPS4B-207ENST00000591519 NAP1L1P55209 391 aaKnown RBP10.25□□□□□ -0.77
VPS4B-207ENST00000591519 AP1B1Q10567 949 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 MAP7Q14244 749 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 TEX44Q53QW1 395 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 TMEM26Q6ZUK4 368 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 PRICKLE2Q7Z3G6 844 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 PHYKPLQ8IUZ5 450 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 RHOT2Q8IXI1 618 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 CDK15Q96Q40 435 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 SPATA16Q9BXB7 569 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 MAK16Q9BXY0 300 aaKnown RBP10.25□□□□□ -0.77
VPS4B-207ENST00000591519 OR2AG1Q9H205 316 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 PRDM8Q9NQV8 689 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 KLC4Q9NSK0 619 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 SIDT1Q9NXL6 827 aaKnown RBP10.25□□□□□ -0.77
VPS4B-207ENST00000591519 OGFRQ9NZT2 677 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 SCHIP1Q9P0W5 487 aaPredicted RBP10.25□□□□□ -0.77
VPS4B-207ENST00000591519 ZNF624Q9P2J8 865 aaPredicted RBP10.25□□□□□ -0.77
VPS4B-207ENST00000591519 IMPACTQ9P2X3 320 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 HEY1Q9Y5J3 304 aa10.25□□□□□ -0.77
VPS4B-207ENST00000591519 MN1Q10571 1320 aaPredicted RBP10.25□□□□□ -0.77
VPS4B-207ENST00000591519 LOC101059948A0A1B0GTJ6 334 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 LOC285095A0A1B0GVY8 99 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 GOLGA6L3A6NEY3 463 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 APOL1O14791 398 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 PPP1R12AO14974 1030 aaPredicted RBP10.24□□□□□ -0.77
VPS4B-207ENST00000591519 POLR1CO15160 346 aaPredicted RBP10.24□□□□□ -0.77
VPS4B-207ENST00000591519 SPOPO43791 374 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 KCNJ13O60928 360 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 NDST3O95803 873 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 DLGAP3O95886 979 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 EPOP01588 193 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 ZNF7P17097 686 aaPredicted RBP10.24□□□□□ -0.77
VPS4B-207ENST00000591519 BPIP17213 487 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 COMTP21964 271 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 HMGCLP35914 325 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 SLC1A1P43005 524 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 CCR10P46092 362 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 POLE2P56282 527 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 GALNT3Q14435 633 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 TAZQ16635 292 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 ZNF569Q5MCW4 686 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 SNAP47Q5SQN1 464 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 ZNF648Q5T619 568 aaPredicted RBP10.24□□□□□ -0.77
VPS4B-207ENST00000591519 AGAP9Q5VTM2 703 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 BZW1Q7L1Q6 419 aaKnown RBP10.24□□□□□ -0.77
VPS4B-207ENST00000591519 KDELC2Q7Z4H8 507 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 KIAA1328Q86T90 577 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 LRRTM4Q86VH4 590 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 ZNF547Q8IVP9 402 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.24□□□□□ -0.77
VPS4B-207ENST00000591519 KIAA1143Q96AT1 154 aaPredicted RBP10.24□□□□□ -0.77
VPS4B-207ENST00000591519 C9orf72Q96LT7 481 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 TEKT5Q96M29 485 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 AGAP3Q96P47 875 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 VPS35Q96QK1 796 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 CTRCQ99895 268 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 TIMM29Q9BSF4 260 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 TBC1D10AQ9BXI6 508 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 RAB33BQ9H082 229 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 GPN2Q9H9Y4 310 aaPredicted RBP10.24□□□□□ -0.77
VPS4B-207ENST00000591519 GRPEL1Q9HAV7 217 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 GLOD4Q9HC38 313 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 APMAPQ9HDC9 416 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 SLC40A1Q9NP59 571 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 LUC7LQ9NQ29 371 aaKnown RBP10.24□□□□□ -0.77
VPS4B-207ENST00000591519 TMPRSS11EQ9UL52 423 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 INTUQ9ULD6 942 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 SHOC2Q9UQ13 582 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 REXO2Q9Y3B8 237 aaKnown RBP10.24□□□□□ -0.77
VPS4B-207ENST00000591519 ZNF711Q9Y462 761 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 SLC30A1Q9Y6M5 507 aa10.24□□□□□ -0.77
VPS4B-207ENST00000591519 A0A0U1RQJ8 604 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 PYCARD-AS1I3L0S3 204 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 NKX2-8O15522 239 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 STK17BO94768 372 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 CDK14O94921 469 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 LCA5LO95447 670 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 MT-CYBP00156 380 aaPredicted RBP10.23□□□□□ -0.77
VPS4B-207ENST00000591519 VIPP01282 170 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 KRT1P04264 644 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 PIRTP0C851 137 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 BRAFP15056 766 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 NR2C2P49116 596 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 NFKB2Q00653 900 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 TMEM115Q12893 351 aaPredicted RBP10.23□□□□□ -0.77
VPS4B-207ENST00000591519 KCNAB2Q13303 367 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 IL11RAQ14626 422 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 LLGL1Q15334 1064 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 ALS2CLQ60I27 953 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 CCDC70Q6NSX1 233 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 NPNTQ6UXI9 565 aa10.23□□□□□ -0.77
VPS4B-207ENST00000591519 C11orf96Q7Z7L8 435 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms