RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 TMX2-CTNND1H3BSU7 103 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 PGRMC1O00264 195 aaKnown RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 CES2O00748 559 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 BRINP1O60477 761 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 KCNJ13O60928 360 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 POP7O75817 140 aaKnown RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 CPNE6O95741 557 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 RALBP11234 206 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 XRCC1P18887 633 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 ITGALP20701 1170 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 IDSP22304 550 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 PSMA3P25788 255 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 RPL10P27635 214 aaKnown RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 CD1CP29017 333 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 MC4RP32245 332 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 LSSP48449 732 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 CDKN1CP49918 316 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 INHBCP55103 352 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 GABREP78334 506 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 BASP1P80723 227 aaKnown RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 ZFP36L1Q07352 338 aaKnown RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 LAMB3Q13751 1172 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 TRIP13Q15645 432 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 SEPT7Q16181 437 aaKnown RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 CYP1B1Q16678 543 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 KCTD19Q17RG1 926 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 GPR33Q49SQ1 333 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 ZRANB3Q5FWF4 1079 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 C3orf38Q5JPI3 329 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 FNBP1LQ5T0N5 605 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 TTC27Q6P3X3 843 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 ABRAXAS1Q6UWZ7 409 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 WASH2PQ6VEQ5 465 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 USP53Q70EK8 1073 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 DET1Q7L5Y6 550 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 TMPRSS9Q7Z410 1059 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 SLC9B2Q86UD5 537 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF761Q86XN6 746 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 BEND7Q8N7W2 519 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 ACTRT1Q8TDG2 376 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 SH3KBP1Q96B97 665 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 DCUN1D1Q96GG9 259 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 LIN37Q96GY3 246 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 TMEM74Q96NL1 305 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 SLC38A3Q99624 504 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 COPS8Q99627 209 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 NUDT22Q9BRQ3 303 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 STN1Q9H668 368 aaKnown RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 RDH14Q9HBH5 336 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 SARS2Q9NP81 518 aaKnown RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 WASH6PQ9NQA3 447 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 EIF2B3Q9NR50 452 aaKnown RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 KCNK4Q9NYG8 393 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 SMARCAL1Q9NZC9 954 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 SCHIP1Q9P0W5 487 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 CPNE7Q9UBL6 633 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 SATB2Q9UPW6 733 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 RAXQ9Y2V3 346 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 LOC400499M0QZD8 3231 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 CACNA1BQ00975 2339 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 IGLV3-16A0A075B6K0 115 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 CCDC187A0A096LP49 1063 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 TRBV5-4A0A0C4DH59 114 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 HEATR9A2RTY3 570 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 PDZK1P1A8MUH7 402 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 CFAP99D6REC4 459 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF185O15231 689 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 SGTAO43765 313 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 DXOO77932 396 aaKnown RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 PRSS56P0CW18 603 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 ATP1B2P14415 290 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 BRAFP15056 766 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 ADRA1DP25100 572 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 ACRV1P26436 265 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 PBLDP30039 288 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 CCKBRP32239 447 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 COILP38432 576 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 SLC19A1P41440 591 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 ARSDP51689 593 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 DRG2P55039 364 aaKnown RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 GNG11P61952 73 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 UBE2IP63279 158 aaKnown RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 GPLD1P80108 840 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 CDK16Q00536 496 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 CACNG1Q06432 222 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 DMPKQ09013 629 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 GPS1Q13098 491 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 SQSTM1Q13501 440 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 CLPPQ16740 277 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 MAP9Q49MG5 647 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 TSTD2Q5T7W7 516 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 AGAP9Q5VTM2 703 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 NKAIN2Q5VXU1 208 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 CCDC137Q6PK04 289 aaKnown RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF574Q6ZN55 896 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 FAM83HQ6ZRV2 1179 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-223ENST00000591239 MICALCLQ6ZW33 695 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 TAS2R42Q7RTR8 314 aa9.03□□□□□ -0.96
DNMT1-223ENST00000591239 SERPINA9Q86WD7 417 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms