RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 C6orf10Q5SRN2 563 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 GRAMD4Q6IC98 578 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 FAM117BQ6P1L5 589 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 LRRC58Q96CX6 371 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 FAM126AQ9BYI3 521 aaPredicted RBP18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 TRIM54Q9BYV2 358 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 CIPCQ9C0C6 399 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 MUC13Q9H3R2 512 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 RC3H2Q9HBD1 1191 aaKnown RBP18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 ZIM2Q9NZV7 527 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 CFAP97Q9P2B7 532 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 SUN2Q9UH99 717 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 HTTP42858 3142 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 LTBP2Q14767 1821 aa18.93■□□□□ 0.62
PRKCSH-209ENST00000589838 DYTNA2CJ06 578 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 AQP12BA6NM10 295 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 IQCF5A8MTL0 148 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 SLC22A3O75751 556 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 OR4F21O95013 312 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 LRG1P02750 347 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 SERPINA4P29622 427 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 PRDX3P30048 256 aaKnown RBP18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 NFATC2Q13469 925 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 RNF220Q5VTB9 566 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 FAM219BQ5XKK7 198 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 UGT2A3Q6UWM9 527 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 AQP12AQ8IXF9 295 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 BHMTQ93088 406 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 EME1Q96AY2 570 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 UHRF1Q96T88 793 aaPredicted RBP18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 ZNF225Q9UK10 706 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 ZNF106Q9H2Y7 1883 aaKnown RBP18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 TRAV19A0A0A6YYK7 116 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 TRBV5-4A0A0C4DH59 114 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 A0A0U1RQS6 177 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 SMAD6O43541 496 aaKnown RBP18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 GLUD1P00367 558 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 NPPAP01160 153 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 PFKLP17858 780 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 HNF1BP35680 557 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 LMAN2Q12907 356 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 RCAN2Q14206 197 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 INPP5AQ14642 412 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 TLR1Q15399 786 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 ATP6AP1LQ52LC2 224 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 PLEKHG4BQ96PX9 1271 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 TSC22D3Q99576 134 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 IL1RL2Q9HB29 575 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 ARMC1Q9NVT9 282 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 CRLS1Q9UJA2 301 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 LEF1Q9UJU2 399 aaPredicted RBP18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 AP4B1Q9Y6B7 739 aa18.92■□□□□ 0.62
PRKCSH-209ENST00000589838 ANKRD12Q6UB98 2062 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 GLYATL1P3A0A0U1RQE8 302 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 NME4O00746 187 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 OTCP00480 354 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 ACRV1P26436 265 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 SPAM1P38567 509 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 DIO3P55073 304 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 CYP4F8P98187 520 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 FBXL19Q6PCT2 694 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 CYP2R1Q6VVX0 501 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 CCDC149Q6ZUS6 474 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 SLC15A3Q8IY34 581 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 ELMOD1Q8N336 334 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 CDYL2Q8N8U2 506 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 PDPRQ8NCN5 879 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 TTC16Q8NEE8 873 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 OR6K2Q8NGY2 324 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 METTL6Q8TCB7 284 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 SLC39A3Q9BRY0 314 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 HTATIP2Q9BUP3 242 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 NOL11Q9H8H0 719 aaKnown RBP18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 SLC52A3Q9NQ40 469 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 ATP11BQ9Y2G3 1177 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 OARD1Q9Y530 152 aa18.91■□□□□ 0.62
PRKCSH-209ENST00000589838 FAM234BA2RU67 622 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 GRXCR2A6NFK2 248 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 CCDC154A6NI56 674 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 GAPDHSO14556 408 aaPredicted RBP18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 FFAR2O15552 330 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 SYNCRIPO60506 623 aaKnown RBP18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 LILRB3O75022 631 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 EEDO75530 441 aaKnown RBP18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 CLDN7O95471 211 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 ARL1P40616 181 aaPredicted RBP18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 POLR2JP52435 117 aaKnown RBP18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 ERVPABLB-1P60509 514 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 SNRPD1P62314 119 aaKnown RBP18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 GTF2H2Q13888 395 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 NFYCQ13952 458 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 PLEKHG6Q3KR16 790 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 C6orf136Q5SQH8 315 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 GTF2H2CQ6P1K8 395 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 METTL2BQ6P1Q9 378 aaKnown RBP18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 SBSNQ6UWP8 590 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 MACC1Q6ZN28 852 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 GAREM2Q75VX8 874 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 GOLGA7Q7Z5G4 137 aa18.9■□□□□ 0.62
PRKCSH-209ENST00000589838 FIBCD1Q8N539 461 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms