RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 UPK3BL2E5RIL1 263 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 PSMD12O00232 456 aaPredicted RBP10.26□□□□□ -0.77
VPS25-203ENST00000589520 UBFD1O14562 309 aaKnown RBP10.26□□□□□ -0.77
VPS25-203ENST00000589520 ARHGEF15O94989 841 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 PSMG1O95456 288 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 PRNPP04156 253 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 UGT2B4P06133 528 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 MPC1LP0DKB6 136 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 SYN1P17600 705 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 CEBPBP17676 345 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 MSH3P20585 1137 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 GKP32189 559 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 PIK3CGP48736 1102 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 AP2B1P63010 937 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 SH3BP2P78314 561 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 NTHL1P78549 312 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 SLC25A3Q00325 362 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 CDKL1Q00532 357 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 CUL3Q13618 768 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 GEN1Q17RS7 908 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 SMU1Q2TAY7 513 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 EML3Q32P44 896 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 KHDC1Q4VXA5 237 aaKnown RBP10.26□□□□□ -0.77
VPS25-203ENST00000589520 PLEKHS1Q5SXH7 462 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 C1orf146Q5VVC0 180 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 OGFOD2Q6N063 350 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 ERAP2Q6P179 960 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 HACD2Q6Y1H2 254 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 NEK10Q6ZWH5 1172 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 SNX32Q86XE0 403 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 ZSWIM9Q86XI8 627 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 TCAIMQ8N3R3 496 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 TRAM1L1Q8N609 369 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 PNPLA1Q8N8W4 532 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 GPR26Q8NDV2 337 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 TMIEQ8NEW7 156 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 TRPC4APQ8TEL6 797 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 UCMAQ8WVF2 138 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 SMARCD2Q92925 531 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 EXT2Q93063 718 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 VOPP1Q96AW1 172 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 DCUN1D1Q96GG9 259 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 MRGPRX3Q96LB0 322 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 CATSPER2Q96P56 530 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 ZSCAN5AQ9BUG6 496 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 TRIM54Q9BYV2 358 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 SHCBP1LQ9BZQ2 653 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 FAM83DQ9H4H8 585 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 SARS2Q9NP81 518 aaKnown RBP10.26□□□□□ -0.77
VPS25-203ENST00000589520 STX18Q9P2W9 335 aaKnown RBP10.26□□□□□ -0.77
VPS25-203ENST00000589520 B4GALT6Q9UBX8 382 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 SLC7A8Q9UHI5 535 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 PCTPQ9UKL6 214 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 ANGPTL2Q9UKU9 493 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 FNDC3AQ9Y2H6 1198 aaKnown RBP10.26□□□□□ -0.77
VPS25-203ENST00000589520 COPG1Q9Y678 874 aaKnown RBP10.26□□□□□ -0.77
VPS25-203ENST00000589520 WNT6Q9Y6F9 365 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 WASF2Q9Y6W5 498 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 DNAH12Q6ZR08 3092 aa10.26□□□□□ -0.77
VPS25-203ENST00000589520 DYTNA2CJ06 578 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 PABPN1LA6NDY0 278 aaKnown RBP10.25□□□□□ -0.77
VPS25-203ENST00000589520 H0Y858 1186 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 FFAR2O15552 330 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 MATN4O95460 622 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 ANP32DO95626 131 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 OTCP00480 354 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 CYP17A1P05093 508 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 C8GP07360 202 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 CA3P07451 260 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 SNRPB2P08579 225 aaKnown RBP10.25□□□□□ -0.77
VPS25-203ENST00000589520 C1SP09871 688 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 VCLP18206 1134 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 GNAZP19086 355 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 UGT1A6P19224 532 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 ITGAXP20702 1163 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 UGT1A1P22309 533 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 UGT1A4P22310 534 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 FSHRP23945 695 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 UGT1A3P35503 534 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 UGT1A5P35504 534 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 CCR3P51677 355 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 MTTPP55157 894 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 CDH13P55290 713 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 SLC34A1Q06495 639 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 TBL3Q12788 808 aaKnown RBP10.25□□□□□ -0.77
VPS25-203ENST00000589520 SP140Q13342 867 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 KPNB1Q14974 876 aaKnown RBP10.25□□□□□ -0.77
VPS25-203ENST00000589520 CCDC6Q16204 474 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 ZNF284Q2VY69 593 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 SPATS1Q496A3 300 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 ACSBG2Q5FVE4 666 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 COQ5Q5HYK3 327 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 LDLRAP1Q5SW96 308 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 TMEM184AQ6ZMB5 413 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 NUDT18Q6ZVK8 323 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 Q6ZVU0 165 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 DPPA4Q7L190 304 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 ADGRG6Q86SQ4 1221 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 NLRP8Q86W28 1048 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms