RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 LIMK1P53667 647 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 ARHGAP8P85298 464 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 CUL1Q13616 776 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 ITIH4Q14624 930 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 RSPO4Q2I0M5 234 aaPredicted RBP22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 CERS6Q6ZMG9 384 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 GKN2Q86XP6 184 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 EID2Q8N6I1 236 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 HEXDCQ8WVB3 486 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 SCARF2Q96GP6 870 aaPredicted RBP22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 FAM167BQ9BTA0 163 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 GSDMCQ9BYG8 508 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 FAM129AQ9BZQ8 928 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 FOXP3Q9BZS1 431 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 CLPBQ9H078 707 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 DNAJC16Q9Y2G8 782 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 CABIN1Q9Y6J0 2220 aa22.14■■□□□ 1.13
R3HDM4-205ENST00000589445 NEMP2A6NFY4 417 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 B4DGG1 531 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 KMOO15229 486 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 NDUFS3O75489 264 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 F7P08709 466 aaPredicted RBP22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 ALPPL2P10696 532 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 AK4P27144 223 aaPredicted RBP22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 PPARGP37231 505 aaPredicted RBP22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 ACTR1BP42025 376 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 ACTR1AP61163 376 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 CTBSQ01459 385 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 SLC14A1Q13336 389 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 NEPROQ6NW34 567 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 TMEM220Q6QAJ8 160 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 KANSL1Q7Z3B3 1105 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 SDCCAG8Q86SQ7 713 aaPredicted RBP22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 BEND7Q8N7W2 519 aaPredicted RBP22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 SGF29Q96ES7 293 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 CERS2Q96G23 380 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 SGSM3Q96HU1 749 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 C9orf72Q96LT7 481 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 PHACTR1Q9C0D0 580 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 IARS2Q9NSE4 1012 aaKnown RBP22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 TRNAU1APQ9NX07 287 aaKnown RBP22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 SIRPGQ9P1W8 387 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 FAM169AQ9Y6X4 670 aa22.13■■□□□ 1.13
R3HDM4-205ENST00000589445 CACNA1GO43497 2377 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 IGLV3-16A0A075B6K0 115 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 CHUKO15111 745 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 OR1I1O60431 355 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 ERVK-10P10266 1014 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 CD59P13987 128 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 ATP1B2P14415 290 aaPredicted RBP22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 OGNP20774 298 aaKnown RBP22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 NSG1P42857 185 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 SLC1A2P43004 574 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 LRP8Q14114 963 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 HSP90AA5PQ58FG0 334 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 STEAP4Q687X5 459 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 ZNF547Q8IVP9 402 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 PALM2Q8IXS6 379 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 GSPT2Q8IYD1 628 aaKnown RBP22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 SLC25A45Q8N413 288 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 CLDN19Q8N6F1 224 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 GSDMBQ8TAX9 411 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 NFU1Q9UMS0 254 aa22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 V9GYY5 206 aaPredicted RBP22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 COL5A1P20908 1838 aaPredicted RBP22.12■■□□□ 1.13
R3HDM4-205ENST00000589445 LMO7DNF2Z398 122 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 PFDN6O15212 129 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 SH3BP5O60239 455 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 ZNF7P17097 686 aaPredicted RBP22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 VCLP18206 1134 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 ECHS1P30084 290 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 MAGEA4P43358 317 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 EIF3BP55884 814 aaKnown RBP22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 RNF187Q5TA31 235 aaPredicted RBP22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 PACS1Q6VY07 963 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 CEP128Q6ZU80 1094 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 GABPB2Q8TAK5 448 aaPredicted RBP22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 CALML6Q8TD86 181 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 ZNF514Q96K75 400 aaPredicted RBP22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 CAMK1GQ96NX5 476 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 TIMM29Q9BSF4 260 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 PLAC1Q9HBJ0 212 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 KLC4Q9NSK0 619 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 NLGN3Q9NZ94 848 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 SLC17A6Q9P2U8 582 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 CSNK1G3Q9Y6M4 447 aa22.11■■□□□ 1.13
R3HDM4-205ENST00000589445 SNX2O60749 519 aa22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 KCNA4P22459 653 aa22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 PRLHRP49683 370 aa22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 SEPT7Q16181 437 aaKnown RBP22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 TYSND1Q2T9J0 566 aa22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 BCL7AQ4VC05 210 aa22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 TRMT10BQ6PF06 316 aaKnown RBP22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 CILP2Q8IUL8 1156 aa22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 DENND6AQ8IWF6 608 aa22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 FAM46DQ8NEK8 389 aa22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 OR4C6Q8NH72 309 aa22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 GPBAR1Q8TDU6 330 aa22.1■■□□□ 1.13
R3HDM4-205ENST00000589445 RHBDD1Q8TEB9 315 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms