RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 C7P10643 843 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 ATP1B2P14415 290 aaPredicted RBP11.26□□□□□ -0.61
SMAD4-205ENST00000588745 ARRB2P32121 409 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 RGS4P49798 205 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 TSNQ15631 228 aaKnown RBP11.26□□□□□ -0.61
SMAD4-205ENST00000588745 MLF2Q15773 248 aaPredicted RBP11.26□□□□□ -0.61
SMAD4-205ENST00000588745 CRY1Q16526 586 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 TTC31Q49AM3 519 aaPredicted RBP11.26□□□□□ -0.61
SMAD4-205ENST00000588745 KHDC1Q4VXA5 237 aaKnown RBP11.26□□□□□ -0.61
SMAD4-205ENST00000588745 SLC44A4Q53GD3 710 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 EOGTQ5NDL2 527 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 DET1Q7L5Y6 550 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 PIWIL4Q7Z3Z4 852 aaKnown RBP11.26□□□□□ -0.61
SMAD4-205ENST00000588745 NLRP8Q86W28 1048 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 TMPRSS6Q8IU80 811 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 PELI3Q8N2H9 469 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 DEFB123Q8N688 67 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 RPLP0P6Q8NHW5 317 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 STAG3L4Q8TBR4 150 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 PPP4R1Q8TF05 950 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 EEF1AKMT1Q8WVE0 214 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 C10orf82Q8WW14 230 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 EXT2Q93063 718 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 THOC1Q96FV9 657 aaKnown RBP11.26□□□□□ -0.61
SMAD4-205ENST00000588745 TMEM237Q96Q45 408 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 PLCD4Q9BRC7 762 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 KCTD5Q9NXV2 234 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 NCKIPSDQ9NZQ3 722 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 KLHL42Q9P2K6 505 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 SCML1Q9UN30 329 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 DUSP12Q9UNI6 340 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 ARL2BPQ9Y2Y0 163 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 PIKFYVEQ9Y2I7 2098 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 SYCE1LA8MT33 242 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 SUPT3HB4E1H0 165 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 K7ESM1 405 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 EIF3FO00303 357 aaPredicted RBP11.25□□□□□ -0.61
SMAD4-205ENST00000588745 CDC7O00311 574 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 MAN2B1O00754 1011 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 PLRG1O43660 514 aaKnown RBP11.25□□□□□ -0.61
SMAD4-205ENST00000588745 NPHS1O60500 1241 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 SUPT3HO75486 399 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 TM7SF2O76062 418 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 PCDH8O95206 1070 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 HSPA4LO95757 839 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 TPBGLP0DKB5 382 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 DGKAP23743 735 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 SERPINB5P36952 375 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 GPR1P46091 355 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 KCNC1P48547 511 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 ZBTB16Q05516 673 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 RCN2Q14257 317 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 ACSBG2Q5FVE4 666 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 ATG14Q6ZNE5 492 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 ADAMTSL2Q86TH1 951 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 MYO1HQ8N1T3 1032 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 PIWIL2Q8TC59 973 aaKnown RBP11.25□□□□□ -0.61
SMAD4-205ENST00000588745 GANCQ8TET4 914 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 FUBP1Q96AE4 644 aaKnown RBP11.25□□□□□ -0.61
SMAD4-205ENST00000588745 ZCCHC2Q9C0B9 1178 aaKnown RBP11.25□□□□□ -0.61
SMAD4-205ENST00000588745 DRC3Q9H069 523 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 SLC6A17Q9H1V8 727 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 CYP4F12Q9HCS2 524 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 FBXL12Q9NXK8 326 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 MBD1Q9UIS9 605 aaPredicted RBP11.25□□□□□ -0.61
SMAD4-205ENST00000588745 CNOT6Q9ULM6 557 aaKnown RBP11.25□□□□□ -0.61
SMAD4-205ENST00000588745 RNF112Q9ULX5 631 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 MMP17Q9ULZ9 603 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 DNAJC16Q9Y2G8 782 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 USH1CQ9Y6N9 552 aa11.25□□□□□ -0.61
SMAD4-205ENST00000588745 ATG2BQ96BY7 2078 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 UBXN8O00124 270 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 INPP4BO15327 924 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 SGTAO43765 313 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 SNUPNO95149 360 aaKnown RBP11.24□□□□□ -0.61
SMAD4-205ENST00000588745 FTH1P02794 183 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 CBSLP0DN79 551 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 ENO3P13929 434 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-205ENST00000588745 MTHFD2P13995 350 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 AOAHP28039 575 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 CCR7P32248 378 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 CBSP35520 551 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 PRLHRP49683 370 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 NAGLUP54802 743 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 DMTNQ08495 405 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 AGERQ15109 404 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 ZNF648Q5T619 568 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-205ENST00000588745 KIAA1161Q6NSJ0 714 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 C6orf89Q6UWU4 347 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 ADAMTSL4Q6UY14 1074 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 TRIM67Q6ZTA4 783 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 CCNYL1Q8N7R7 359 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 PTGR2Q8N8N7 351 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-205ENST00000588745 RFWD2Q8NHY2 731 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 PHF21BQ96EK2 531 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 L3HYPDHQ96EM0 354 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 SIPA1Q96FS4 1042 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 SIKE1Q9BRV8 207 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 TMEM120AQ9BXJ8 343 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 MARCOQ9UEW3 520 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms