RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 TCAF1Q9Y4C2 921 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 GPR89AB7ZAQ6 455 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 LMO7DNF2Z398 122 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 FFAR2O15552 330 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 GPR39O43194 453 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 GPR89BP0CG08 455 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 GIMD1P0DJR0 217 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 ALPPL2P10696 532 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 CEACAM1P13688 526 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 ATP5DP30049 168 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 GNPDA1P46926 289 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 NFATC2Q13469 925 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 C1orf61Q13536 156 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 PEX6Q13608 980 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 ARMC3Q5W041 872 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 CYS1Q717R9 158 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 TDRPQ86YL5 185 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 ZNF398Q8TD17 642 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 PTCD2Q8WV60 388 aaKnown RBP19.91■□□□□ 0.78
ATG4D-208ENST00000588667 PEX13Q92968 403 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 DUSP23Q9BVJ7 150 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 CLPBQ9H078 707 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 RMI1Q9H9A7 625 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 TRNAU1APQ9NX07 287 aaKnown RBP19.91■□□□□ 0.78
ATG4D-208ENST00000588667 CACNA1AO00555 2505 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 POC1B-GALNT4F8VUJ3 575 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 TPP1O14773 563 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 UGT1A9O60656 530 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 UGT1A6P19224 532 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 ITGALP20701 1170 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 UGT1A1P22309 533 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 UGT1A4P22310 534 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 UGT1A3P35503 534 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 UGT1A5P35504 534 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 NOVA1P51513 510 aaKnown RBP19.9■□□□□ 0.78
ATG4D-208ENST00000588667 RASA2Q15283 850 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 PCID2Q5JVF3 399 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 SPANXN3Q5MJ09 141 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 LDLRAP1Q5SW96 308 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 TSTD2Q5T7W7 516 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 MARK2Q7KZI7 788 aaKnown RBP19.9■□□□□ 0.78
ATG4D-208ENST00000588667 DDHD1Q8NEL9 900 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 CDKN2AIPNLQ96HQ2 116 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 OR2M4Q96R27 311 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 TMEM168Q9H0V1 697 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 ASB8Q9H765 288 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 UGT1A7Q9HAW7 530 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 UGT1A10Q9HAW8 530 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 UGT1A8Q9HAW9 530 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 ATXN10Q9UBB4 475 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 FTSJ1Q9UET6 329 aa19.9■□□□□ 0.78
ATG4D-208ENST00000588667 CCDC78A2IDD5 438 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 AGAP14A8MT82 685 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 CCL22O00626 93 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 TRIM38O00635 465 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 VEGFDO43915 354 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 DNAJC6O75061 913 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 KCNK5O95279 499 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 CELA2BP08218 269 aaPredicted RBP19.89■□□□□ 0.77
ATG4D-208ENST00000588667 MC4RP32245 332 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 PYCR3Q53H96 274 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 GPRC6AQ5T6X5 926 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 SNX20Q7Z614 316 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 ADGRG6Q86SQ4 1221 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 GKN2Q86XP6 184 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 GALNT13Q8IUC8 556 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 OR13J1Q8NGT2 312 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 GDAP1Q8TB36 358 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 ZCCHC2Q9C0B9 1178 aaKnown RBP19.89■□□□□ 0.77
ATG4D-208ENST00000588667 OR2AG1Q9H205 316 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 SUDS3Q9H7L9 328 aaPredicted RBP19.89■□□□□ 0.77
ATG4D-208ENST00000588667 PLAC1Q9HBJ0 212 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 LGALS13Q9UHV8 139 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 SLC30A1Q9Y6M5 507 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 RPS6KL1Q9Y6S9 549 aa19.89■□□□□ 0.77
ATG4D-208ENST00000588667 FAM237BA0A1B0GVD1 139 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 POLR3GO15318 223 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-208ENST00000588667 NUAK1O60285 661 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 USP1O94782 785 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 ANXA6P08133 673 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 ACVR1Q04771 509 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 ILF3Q12906 894 aaKnown RBP eCLIP19.88■□□□□ 0.77
ATG4D-208ENST00000588667 CRYMQ14894 314 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 TCEA2Q15560 299 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 DEFB133Q30KQ1 61 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 KBTBD12Q3ZCT8 623 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 KHDC1Q4VXA5 237 aaKnown RBP19.88■□□□□ 0.77
ATG4D-208ENST00000588667 ZNF648Q5T619 568 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-208ENST00000588667 PSAPL1Q6NUJ1 521 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 LVRNQ6Q4G3 990 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 TMEM135Q86UB9 458 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 ULK4Q96C45 1275 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 MRM3Q9HC36 420 aaKnown RBP19.88■□□□□ 0.77
ATG4D-208ENST00000588667 PSMC3IPQ9P2W1 217 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-208ENST00000588667 CRLS1Q9UJA2 301 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 SOX13Q9UN79 622 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 NOVA2Q9UNW9 492 aaKnown RBP19.88■□□□□ 0.77
ATG4D-208ENST00000588667 DOLKQ9UPQ8 538 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 IKBKGQ9Y6K9 419 aa19.88■□□□□ 0.77
ATG4D-208ENST00000588667 PIKFYVEQ9Y2I7 2098 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms