RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 K7EQS6 105 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 CCDC22O60826 627 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 MTX2O75431 263 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 GM2AP17900 193 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 SEC13P55735 322 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 ACTN3Q08043 901 aaPredicted RBP19.59■□□□□ 0.73
TRIM47-204ENST00000587339 SEL1L3Q68CR1 1132 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 RPS27LQ71UM5 84 aaKnown RBP19.59■□□□□ 0.73
TRIM47-204ENST00000587339 DET1Q7L5Y6 550 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 GPSM1Q86YR5 675 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 MYO1HQ8N1T3 1032 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 DTD2Q96FN9 168 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 HDAC8Q9BY41 377 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 NMUR2Q9GZQ4 415 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 GSTO2Q9H4Y5 243 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 LATS2Q9NRM7 1088 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 VTI1BQ9UEU0 232 aa19.59■□□□□ 0.73
TRIM47-204ENST00000587339 TSR3Q9UJK0 312 aaKnown RBP19.59■□□□□ 0.73
TRIM47-204ENST00000587339 FCHO1O14526 889 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 SIX3O95343 332 aaPredicted RBP19.58■□□□□ 0.72
TRIM47-204ENST00000587339 TIE1P35590 1138 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 P2RY2P41231 377 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 KIR2DL1P43626 348 aaPredicted RBP19.58■□□□□ 0.72
TRIM47-204ENST00000587339 CRY1Q16526 586 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 SH2D4BQ5SQS7 431 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 EPGNQ6UW88 154 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 CYP2U1Q7Z449 544 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 ADAMTSL2Q86TH1 951 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 DDHD1Q8NEL9 900 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 BTN2A2Q8WVV5 523 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 RAB7BQ96AH8 199 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 VPS35Q96QK1 796 aa19.58■□□□□ 0.72
TRIM47-204ENST00000587339 PLXNB3Q9ULL4 1909 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 NCF1BA6NI72 391 aaPredicted RBP19.57■□□□□ 0.72
TRIM47-204ENST00000587339 NCF1CA8MVU1 366 aaPredicted RBP19.57■□□□□ 0.72
TRIM47-204ENST00000587339 SPECC1L-ADORA2AF8WAN1 911 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 SYNCRIPO60506 623 aaKnown RBP19.57■□□□□ 0.72
TRIM47-204ENST00000587339 RNASEH1O60930 286 aaKnown RBP19.57■□□□□ 0.72
TRIM47-204ENST00000587339 UNC5CO95185 931 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 SERPINA6P08185 405 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 NCF1P14598 390 aaPredicted RBP19.57■□□□□ 0.72
TRIM47-204ENST00000587339 MSH3P20585 1137 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 CTHP32929 405 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 CAMK2GQ13555 558 aaPredicted RBP19.57■□□□□ 0.72
TRIM47-204ENST00000587339 TGFBIQ15582 683 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 UNC50Q53HI1 259 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 ACSBG2Q5FVE4 666 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 TXNDC11Q6PKC3 985 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 FRA10AC1Q70Z53 315 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 EZH1Q92800 747 aaPredicted RBP19.57■□□□□ 0.72
TRIM47-204ENST00000587339 FAM161BQ96MY7 647 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 TXLNGQ9NUQ3 528 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 KCTD5Q9NXV2 234 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 KLHL42Q9P2K6 505 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 COQ6Q9Y2Z9 468 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 TICRRQ7Z2Z1 1910 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 PLXNA2O75051 1894 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 KLK8O60259 260 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 SNX2O60749 519 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 RECQL5O94762 991 aaPredicted RBP19.57■□□□□ 0.72
TRIM47-204ENST00000587339 FSBPO95073 299 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 C6P13671 934 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 SATB1Q01826 763 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 CNTN1Q12860 1018 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 TUBB3Q13509 450 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 LDLRAP1Q5SW96 308 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 CUZD1Q86UP6 607 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 CACUL1Q86Y37 369 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 MAPK15Q8TD08 544 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 GLYATL1Q969I3 302 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 PRR11Q96HE9 360 aaPredicted RBP19.57■□□□□ 0.72
TRIM47-204ENST00000587339 RSPH9Q9H1X1 276 aaPredicted RBP19.57■□□□□ 0.72
TRIM47-204ENST00000587339 SAR1AQ9NR31 198 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 UTP6Q9NYH9 597 aaKnown RBP19.57■□□□□ 0.72
TRIM47-204ENST00000587339 CD274Q9NZQ7 290 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 TMCO1Q9UM00 188 aa19.57■□□□□ 0.72
TRIM47-204ENST00000587339 BRWD1Q9NSI6 2320 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 GRXCR2A6NFK2 248 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 C2CD4DB7Z1M9 353 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 LZTS3O60299 673 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-204ENST00000587339 MMP20O60882 483 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 ATP5HO75947 161 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 CBSLP0DN79 551 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 TARSP26639 723 aaKnown RBP19.56■□□□□ 0.72
TRIM47-204ENST00000587339 EEF1DP29692 281 aaKnown RBP19.56■□□□□ 0.72
TRIM47-204ENST00000587339 CCR7P32248 378 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 CBSP35520 551 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 ALDH18A1P54886 795 aaKnown RBP19.56■□□□□ 0.72
TRIM47-204ENST00000587339 CDH13P55290 713 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 CST6Q15828 149 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 TMEM52BQ4KMG9 183 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 NUS1Q96E22 293 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 ASB2Q96Q27 587 aa19.56■□□□□ 0.72
TRIM47-204ENST00000587339 GAS2L1Q99501 681 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-204ENST00000587339 MBD1Q9UIS9 605 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-204ENST00000587339 A0A1W2PPC1 479 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 TMEM233B4DJY2 109 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 STX16-NPEPL1H3BU86 382 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 MYO1CO00159 1063 aa19.55■□□□□ 0.72
TRIM47-204ENST00000587339 STX16O14662 325 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms