RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 CCDC3Q9BQI4 270 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 ZMYND15Q9H091 742 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 RAB17Q9H0T7 212 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 FAM96AQ9H5X1 160 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 SYNDIG1Q9H7V2 258 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 CATSPERZQ9NTU4 200 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 SYBUQ9NX95 663 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 TMPRSS11EQ9UL52 423 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 ACSL5Q9ULC5 683 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 CLCA2Q9UQC9 943 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 DNAJC16Q9Y2G8 782 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 UTP11Q9Y3A2 253 aaKnown RBP13.89□□□□□ -0.19
TPM4-205ENST00000586833 MAD1L1Q9Y6D9 718 aa13.89□□□□□ -0.19
TPM4-205ENST00000586833 CEP250Q9BV73 2442 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 FAM237BA0A1B0GVD1 139 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 TCRBV7S3A2A0A539 114 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 GOLGA8MH3BSY2 632 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 CCL22O00626 93 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 TTI1O43156 1089 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 HYAL3O43820 417 aaPredicted RBP13.88□□□□□ -0.19
TPM4-205ENST00000586833 OPA1O60313 960 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 TMEM63AO94886 807 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 TTC4O95801 387 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 POLBP06746 335 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 FOXN2P32314 431 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 PTGIRP43119 386 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 PRLHRP49683 370 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 ARL4CP56559 192 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 PLOD1Q02809 727 aaPredicted RBP13.88□□□□□ -0.19
TPM4-205ENST00000586833 THOC5Q13769 683 aaKnown RBP13.88□□□□□ -0.19
TPM4-205ENST00000586833 SPIDRQ14159 915 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 HES3Q5TGS1 186 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 AGAP9Q5VTM2 703 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 ANKRD22Q5VYY1 191 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 WASH2PQ6VEQ5 465 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 PACS1Q6VY07 963 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 RBM44Q6ZP01 1051 aaKnown RBP13.88□□□□□ -0.19
TPM4-205ENST00000586833 LMNTD2Q8IXW0 634 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 ARL14Q8N4G2 192 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 OR2L2Q8NH16 312 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 HM13Q8TCT9 377 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 SGF29Q96ES7 293 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 SLC38A3Q99624 504 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 DPYSL5Q9BPU6 564 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 CCM2Q9BSQ5 444 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 EPB41L1Q9H4G0 881 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 SARS2Q9NP81 518 aaKnown RBP13.88□□□□□ -0.19
TPM4-205ENST00000586833 WASH6PQ9NQA3 447 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 PLEKHM1Q9Y4G2 1056 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 PI4KAP42356 2102 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 ANKRD36A6QL64 1941 aa13.88□□□□□ -0.19
TPM4-205ENST00000586833 IGLV3-16A0A075B6K0 115 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 LY6G6EA0A0G2JKS1 128 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 C17orf113A0A1B0GUU1 675 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 CD3EAPO15446 510 aaKnown RBP13.87□□□□□ -0.19
TPM4-205ENST00000586833 GPR39O43194 453 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 NDUFS3O75489 264 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 MT-CO3P00414 261 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 VIPP01282 170 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 SLC35G4P0C7Q5 338 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 MYF5P13349 255 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 PBLDP30039 288 aaPredicted RBP13.87□□□□□ -0.19
TPM4-205ENST00000586833 FASLGP48023 281 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 ARSDP51689 593 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 CTSCP53634 463 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 CRADDP78560 199 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 HHEXQ03014 270 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 DBN1Q16643 649 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 KHDC1Q4VXA5 237 aaKnown RBP13.87□□□□□ -0.19
TPM4-205ENST00000586833 KIAA0930Q6ICG6 404 aaPredicted RBP13.87□□□□□ -0.19
TPM4-205ENST00000586833 IYDQ6PHW0 289 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 ZNF534Q76KX8 674 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 CAND1Q86VP6 1230 aaKnown RBP13.87□□□□□ -0.19
TPM4-205ENST00000586833 LRRC6Q86X45 466 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 C17orf82Q86X59 251 aaPredicted RBP13.87□□□□□ -0.19
TPM4-205ENST00000586833 ZNF547Q8IVP9 402 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 NAGSQ8N159 534 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 SFRP1Q8N474 314 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 CALML6Q8TD86 181 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 LRRC39Q96DD0 335 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 CXorf40BQ96DE9 158 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 STAMBPL1Q96FJ0 436 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 AHCYL2Q96HN2 611 aaKnown RBP13.87□□□□□ -0.19
TPM4-205ENST00000586833 GFM1Q96RP9 751 aaKnown RBP13.87□□□□□ -0.19
TPM4-205ENST00000586833 TCF12Q99081 682 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 SCNM1Q9BWG6 230 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 CAAP1Q9H8G2 361 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 TREX1Q9NSU2 369 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 POT1Q9NUX5 634 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 AKAP7Q9P0M2 348 aaPredicted RBP13.87□□□□□ -0.19
TPM4-205ENST00000586833 TBC1D29Q9UFV1 150 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 SLC2A6Q9UGQ3 507 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 MSRB2Q9Y3D2 182 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 HEBP2Q9Y5Z4 205 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 RNF215Q9Y6U7 377 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 U3KQA8 63 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 CFAP54Q96N23 3096 aa13.87□□□□□ -0.19
TPM4-205ENST00000586833 COL5A1P20908 1838 aaPredicted RBP13.87□□□□□ -0.19
TPM4-205ENST00000586833 IFRD1O00458 451 aaPredicted RBP13.86□□□□□ -0.19
TPM4-205ENST00000586833 USP1O94782 785 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms