RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 DNMT3AQ9Y6K1 912 aaPredicted RBP12.95□□□□□ -0.34
ERBB2-220ENST00000584684 TEX51A0A1B0GUA7 166 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 GPR39O43194 453 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 KLK10O43240 276 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 BUD23O43709 281 aaKnown RBP12.94□□□□□ -0.34
ERBB2-220ENST00000584684 SRP72O76094 671 aaKnown RBP12.94□□□□□ -0.34
ERBB2-220ENST00000584684 CCDC175P0C221 793 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 HOXB3P14651 431 aaPredicted RBP12.94□□□□□ -0.34
ERBB2-220ENST00000584684 ITIH1P19827 911 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 IDSP22304 550 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 HADHAP40939 763 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 GDF10P55107 478 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 XIAPP98170 497 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 NFATC2Q13469 925 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 OLIG2Q13516 323 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 OASLQ15646 514 aaKnown RBP12.94□□□□□ -0.34
ERBB2-220ENST00000584684 PLA2G4EQ3MJ16 856 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 ZNF761Q86XN6 746 aaPredicted RBP12.94□□□□□ -0.34
ERBB2-220ENST00000584684 RASGEF1AQ8N9B8 481 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 OR4K2Q8NGD2 314 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 NAF1Q96HR8 494 aaKnown RBP12.94□□□□□ -0.34
ERBB2-220ENST00000584684 UBL7Q96S82 380 aaPredicted RBP12.94□□□□□ -0.34
ERBB2-220ENST00000584684 APOL2Q9BQE5 337 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 TMEM121Q9BTD3 319 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 SCHIP1Q9P0W5 487 aaPredicted RBP12.94□□□□□ -0.34
ERBB2-220ENST00000584684 GUCA1BQ9UMX6 200 aa12.94□□□□□ -0.34
ERBB2-220ENST00000584684 PRAMEF33A0A0G2JMD5 474 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 ERI2A8K979 691 aaKnown RBP12.93□□□□□ -0.34
ERBB2-220ENST00000584684 PDZK1P1A8MUH7 402 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 B4E171 279 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 H7C0S8 307 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 LDB2O43679 373 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 LIASO43766 372 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 UGT1A9O60656 530 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 PRAMEF10O60809 474 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 METTL18O95568 372 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 AP2A1O95782 977 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 ANKRD34CP0C6C1 535 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 LIPCP11150 499 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 BRAFP15056 766 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 UGT1A6P19224 532 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 UGT1A1P22309 533 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 UGT1A4P22310 534 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 PSMA3P25788 255 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 STIP1P31948 543 aaKnown RBP12.93□□□□□ -0.34
ERBB2-220ENST00000584684 CA5AP35218 305 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 UGT1A3P35503 534 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 ETV5P41161 510 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 TSPAN7P41732 249 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 CTSCP53634 463 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 LONRF2Q1L5Z9 754 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 BCL7AQ4VC05 210 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 MEI1Q5TIA1 1274 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 TMEM164Q5U3C3 297 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 TMEM26Q6ZUK4 368 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 GPR155Q7Z3F1 870 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 ARHGAP22Q7Z5H3 698 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 AMZ2Q86W34 360 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 SLC13A5Q86YT5 568 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-220ENST00000584684 JAMLQ86YT9 394 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 LRRC8AQ8IWT6 810 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 LSM14AQ8ND56 463 aaKnown RBP12.93□□□□□ -0.34
ERBB2-220ENST00000584684 RCBTB1Q8NDN9 531 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 ZNF398Q8TD17 642 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 ATG4AQ8WYN0 398 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 ULK4Q96C45 1275 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 AHCYL2Q96HN2 611 aaKnown RBP12.93□□□□□ -0.34
ERBB2-220ENST00000584684 ALS2CR12Q96Q35 445 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 DDA1Q9BW61 102 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 UGT1A7Q9HAW7 530 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 UGT1A10Q9HAW8 530 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 UGT1A8Q9HAW9 530 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 TMEM9Q9P0T7 183 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 ZNF624Q9P2J8 865 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-220ENST00000584684 FKBPLQ9UIM3 349 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 DNAJC16Q9Y2G8 782 aa12.93□□□□□ -0.34
ERBB2-220ENST00000584684 FASNP49327 2511 aaKnown RBP12.93□□□□□ -0.34
ERBB2-220ENST00000584684 IGLV3-16A0A075B6K0 115 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 TRBV23OR9-2A0A075B6M9 112 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 TRBV5-4A0A0C4DH59 114 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 C9orf172C9J069 976 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 TOX3O15405 576 aaPredicted RBP12.92□□□□□ -0.34
ERBB2-220ENST00000584684 PSMD3O43242 534 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 VIPP01282 170 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 C9P02748 559 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 ITGALP20701 1170 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 CSTF2P33240 577 aaKnown RBP eCLIP12.92□□□□□ -0.34
ERBB2-220ENST00000584684 SLC19A1P41440 591 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 RAB15P59190 212 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 CXADRP78310 365 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 VAC14Q08AM6 782 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 PTPRCAPQ14761 206 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 GPR33Q49SQ1 333 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 SOWAHCQ53LP3 525 aaPredicted RBP12.92□□□□□ -0.34
ERBB2-220ENST00000584684 SDK2Q58EX2 2172 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 LINC00523Q86TU6 105 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 DTX1Q86Y01 620 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 TRIM48Q8IWZ4 208 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 NXPE1Q8N323 547 aa12.92□□□□□ -0.34
ERBB2-220ENST00000584684 OR13C4Q8NGS5 318 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms