RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 OPA1O60313 960 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 AP2A2O94973 939 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 RETP07949 1114 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 ADRB1P08588 477 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 MYZAPP0CAP1 466 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 MYCLP1P12525 358 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 MAOBP27338 520 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 AKT1P31749 480 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 TIAL1Q01085 375 aaKnown RBP eCLIP16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 DNAJC3Q13217 504 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 BMPR2Q13873 1038 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 PDE1CQ14123 709 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 TMED2Q15363 201 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 TNFAIP8L3Q5GJ75 292 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 RBM20Q5T481 1227 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 KYAT3Q6YP21 454 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 Q6ZSR6 202 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CLDN19Q8N6F1 224 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 GPATCH11Q8N954 259 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 C1orf216Q8TAB5 229 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SGF29Q96ES7 293 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 PGM2Q96G03 612 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 HSPA12BQ96MM6 686 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 NDNQ99608 321 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 OR2AG1Q9H205 316 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 EIF2B4Q9UI10 523 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 GNPTGQ9UJJ9 305 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 MAP1BP46821 2468 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 H3BMM5 538 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CACNB4O00305 520 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SLC30A4O14863 429 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CDK14O94921 469 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 ASMTLO95671 621 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 ZNF8P17098 575 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CD9P21926 228 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 RABIFP47224 123 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 KIAA1024LP59773 190 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 POU4F1Q01851 419 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SIM2Q14190 667 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 PLK5Q496M5 336 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 WDR45BQ5MNZ6 344 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 PMS2CLQ68D20 193 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 PTRHD1Q6GMV3 140 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 FAM45BPQ6NSW5 357 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 TMEM220Q6QAJ8 160 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 FAM45AQ8TCE6 357 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 NETO1Q8TDF5 533 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 NAT14Q8WUY8 206 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 ELMO2Q96JJ3 720 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 ZC3H10Q96K80 434 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 PKNOX2Q96KN3 472 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SLC6A18Q96N87 628 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CCDC68Q9H2F9 335 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SEMA4GQ9NTN9 838 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SLC39A10Q9ULF5 831 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 MED16Q9Y2X0 877 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SLCO1B1Q9Y6L6 691 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CEP192Q8TEP8 1941 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 GON4LQ3T8J9 2241 aa16.13■□□□□ 0.17
CDK5RAP3-228ENST00000583363 A0A1W2PPM1 405 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 A0A1W2PR77 199 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 TMEM202A6NGA9 273 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 GOLGA6L10A6NI86 522 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 A6NNZ2 444 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 IQCF5A8MTL0 148 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 NUAK1O60285 661 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 LRP3O75074 770 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 RFPL1O75677 317 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SYF2O95926 243 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CEACAM5P06731 702 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 OR56A5P0C7T3 313 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CTSCP53634 463 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CDKN2DP55273 166 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 TAS2R39P59534 338 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 RACK1P63244 317 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 GTF2H3Q13889 308 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 USP10Q14694 798 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 NFATC4Q14934 902 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 DET1Q7L5Y6 550 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 MFSD2AQ8NA29 543 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 ISL2Q96A47 359 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 ARL8AQ96BM9 186 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SCARF2Q96GP6 870 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 OLFM1Q99784 485 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 ZCCHC2Q9C0B9 1178 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CENPHQ9H3R5 247 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 LATS2Q9NRM7 1088 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 GPR34Q9UPC5 381 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SLC17A4Q9Y2C5 497 aa16.12■□□□□ 0.17
CDK5RAP3-228ENST00000583363 THADAQ6YHU6 1953 aa16.11■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CHD8Q9HCK8 2581 aa16.11■□□□□ 0.17
CDK5RAP3-228ENST00000583363 FOXO6A8MYZ6 492 aa16.11■□□□□ 0.17
CDK5RAP3-228ENST00000583363 GPR89AB7ZAQ6 455 aa16.11■□□□□ 0.17
CDK5RAP3-228ENST00000583363 F8W8V4 182 aa16.11■□□□□ 0.17
CDK5RAP3-228ENST00000583363 QSOX1O00391 747 aa16.11■□□□□ 0.17
CDK5RAP3-228ENST00000583363 CHUKO15111 745 aa16.11■□□□□ 0.17
CDK5RAP3-228ENST00000583363 DNAJC6O75061 913 aa16.11■□□□□ 0.17
CDK5RAP3-228ENST00000583363 NIPSNAP2O75323 286 aa16.11■□□□□ 0.17
CDK5RAP3-228ENST00000583363 RHOBTB1O94844 696 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms